Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SSX4O60224 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.91□□□□□ -1.46
SSX4O60224 AHCYP8-201ENST00000425108 209 ntBASIC5.91□□□□□ -1.46
SSX4O60224 NPM1P23-201ENST00000440193 849 ntBASIC5.91□□□□□ -1.46
SSX4O60224 E2F6P3-201ENST00000441743 743 ntBASIC5.91□□□□□ -1.46
SSX4O60224 SDHCP3-201ENST00000445371 506 ntBASIC5.91□□□□□ -1.46
SSX4O60224 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC5.91□□□□□ -1.46
SSX4O60224 AC099670.1-201ENST00000455141 783 ntBASIC5.91□□□□□ -1.46
SSX4O60224 AC010878.1-201ENST00000456500 1047 ntBASIC5.91□□□□□ -1.46
SSX4O60224 SLC25A51P1-201ENST00000468432 871 ntBASIC5.91□□□□□ -1.46
SSX4O60224 PPP1R11P1-201ENST00000486095 376 ntBASIC5.91□□□□□ -1.46
SSX4O60224 RN7SL37P-201ENST00000490461 307 ntBASIC5.91□□□□□ -1.46
SSX4O60224 AGGF1P3-201ENST00000493675 1213 ntBASIC5.91□□□□□ -1.46
SSX4O60224 RN7SL143P-201ENST00000496780 297 ntBASIC5.91□□□□□ -1.46
SSX4O60224 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.91□□□□□ -1.46
SSX4O60224 AC093878.1-201ENST00000515630 432 ntBASIC5.91□□□□□ -1.46
SSX4O60224 RN7SKP183-201ENST00000517169 324 ntBASIC5.91□□□□□ -1.46
SSX4O60224 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC5.91□□□□□ -1.46
SSX4O60224 BCAS2P1-201ENST00000528022 632 ntBASIC5.91□□□□□ -1.46
SSX4O60224 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.91□□□□□ -1.46
SSX4O60224 PPIAP6-201ENST00000557078 499 ntBASIC5.91□□□□□ -1.46
SSX4O60224 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.91□□□□□ -1.46
SSX4O60224 AC096708.2-201ENST00000577676 512 ntBASIC5.91□□□□□ -1.46
SSX4O60224 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC5.91□□□□□ -1.46
SSX4O60224 WBP1LP11-201ENST00000586141 328 ntBASIC5.91□□□□□ -1.46
SSX4O60224 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.91□□□□□ -1.46
SSX4O60224 AL137246.2-201ENST00000613439 662 ntBASIC5.91□□□□□ -1.46
SSX4O60224 TCL6_3.1-201ENST00000619064 137 ntBASIC5.91□□□□□ -1.46
SSX4O60224 AC127071.2-201ENST00000623293 527 ntBASIC5.91□□□□□ -1.46
SSX4O60224 AC009120.7-201ENST00000623452 780 ntBASIC5.91□□□□□ -1.46
SSX4O60224 AC073857.1-201ENST00000625082 1054 ntBASIC5.91□□□□□ -1.46
SSX4O60224 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.91□□□□□ -1.46
SSX4O60224 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SSX4O60224 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
SSX4O60224 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.91□□□□□ -1.46
SSX4O60224 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.91□□□□□ -1.46
SSX4O60224 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC5.91□□□□□ -1.46
SSX4O60224 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.91□□□□□ -1.46
SSX4O60224 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SSX4O60224 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SSX4O60224 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.91□□□□□ -1.46
SSX4O60224 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.91□□□□□ -1.46
SSX4O60224 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SSX4O60224 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSX4O60224 DOCK11P1-201ENST00000553480 5932 ntBASIC5.9□□□□□ -1.46
SSX4O60224 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SSX4O60224 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SSX4O60224 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.9□□□□□ -1.46
SSX4O60224 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SSX4O60224 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SSX4O60224 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.9□□□□□ -1.46
SSX4O60224 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
SSX4O60224 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SSX4O60224 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SSX4O60224 RNA5SP382-201ENST00000363355 112 ntBASIC5.9□□□□□ -1.46
SSX4O60224 AC245036.1-201ENST00000391727 309 ntBASIC5.9□□□□□ -1.46
SSX4O60224 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SSX4O60224 TMA16P2-201ENST00000413187 601 ntBASIC5.9□□□□□ -1.46
SSX4O60224 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC5.9□□□□□ -1.46
SSX4O60224 NME1P1-201ENST00000420914 382 ntBASIC5.9□□□□□ -1.46
SSX4O60224 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC5.9□□□□□ -1.46
SSX4O60224 DNAJC19P5-201ENST00000443295 316 ntBASIC5.9□□□□□ -1.46
SSX4O60224 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.9□□□□□ -1.46
SSX4O60224 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.9□□□□□ -1.46
SSX4O60224 OR52Y1P-201ENST00000452418 828 ntBASIC5.9□□□□□ -1.46
SSX4O60224 AL139156.3-201ENST00000454802 394 ntBASIC5.9□□□□□ -1.46
SSX4O60224 RN7SL168P-201ENST00000463821 279 ntBASIC5.9□□□□□ -1.46
SSX4O60224 AP000805.1-201ENST00000471604 784 ntBASIC5.9□□□□□ -1.46
SSX4O60224 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SSX4O60224 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC5.9□□□□□ -1.46
SSX4O60224 AC015524.1-201ENST00000491585 472 ntBASIC5.9□□□□□ -1.46
SSX4O60224 AC114324.2-202ENST00000503812 134 ntBASIC5.9□□□□□ -1.46
SSX4O60224 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC5.9□□□□□ -1.46
SSX4O60224 AC093815.1-201ENST00000508637 280 ntBASIC5.9□□□□□ -1.46
SSX4O60224 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC5.9□□□□□ -1.46
SSX4O60224 AC021146.10-201ENST00000515628 706 ntBASIC5.9□□□□□ -1.46
SSX4O60224 RNU6-943P-201ENST00000516960 98 ntBASIC5.9□□□□□ -1.46
SSX4O60224 IGKV2-19-201ENST00000518132 283 ntBASIC5.9□□□□□ -1.46
SSX4O60224 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.9□□□□□ -1.46
SSX4O60224 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.9□□□□□ -1.46
SSX4O60224 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC5.9□□□□□ -1.46
SSX4O60224 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SSX4O60224 MIR4732-201ENST00000581873 76 ntBASIC5.9□□□□□ -1.46
SSX4O60224 MIR4420-201ENST00000583944 77 ntBASIC5.9□□□□□ -1.46
SSX4O60224 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.9□□□□□ -1.46
SSX4O60224 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.9□□□□□ -1.46
SSX4O60224 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC5.9□□□□□ -1.46
SSX4O60224 AC009237.12-201ENST00000604755 742 ntBASIC5.9□□□□□ -1.46
SSX4O60224 AC027559.1-201ENST00000636288 271 ntBASIC5.9□□□□□ -1.46
SSX4O60224 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SSX4O60224 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
SSX4O60224 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SSX4O60224 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
SSX4O60224 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.9□□□□□ -1.47
SSX4O60224 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC5.9□□□□□ -1.47
SSX4O60224 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.9□□□□□ -1.47
SSX4O60224 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.9□□□□□ -1.47
SSX4O60224 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SSX4O60224 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
SSX4O60224 AP002800.1-201ENST00000624982 2225 ntBASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms