Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM38O00635 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
TRIM38O00635 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM38O00635 OR7A2P-201ENST00000304105 930 ntBASIC6.7□□□□□ -1.34
TRIM38O00635 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM38O00635 RNU6-618P-201ENST00000363518 112 ntBASIC6.7□□□□□ -1.34
TRIM38O00635 RNA5SP172-201ENST00000365061 118 ntBASIC6.7□□□□□ -1.34
TRIM38O00635 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
TRIM38O00635 AL589655.1-201ENST00000405398 482 ntBASIC6.7□□□□□ -1.34
TRIM38O00635 RPL12P23-201ENST00000405880 490 ntBASIC6.7□□□□□ -1.34
TRIM38O00635 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM38O00635 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM38O00635 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM38O00635 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM38O00635 CR848007.2-201ENST00000424918 787 ntBASIC6.7□□□□□ -1.34
TRIM38O00635 RPSAP32-201ENST00000432681 526 ntBASIC6.7□□□□□ -1.34
TRIM38O00635 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.7□□□□□ -1.34
TRIM38O00635 PSMA6P2-201ENST00000457574 686 ntBASIC6.7□□□□□ -1.34
TRIM38O00635 AC104339.1-201ENST00000465478 348 ntBASIC6.7□□□□□ -1.34
TRIM38O00635 AC099340.1-201ENST00000475247 599 ntBASIC6.7□□□□□ -1.34
TRIM38O00635 RPL5P12-201ENST00000477071 851 ntBASIC6.7□□□□□ -1.34
TRIM38O00635 OR7E22P-201ENST00000478335 1035 ntBASIC6.7□□□□□ -1.34
TRIM38O00635 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM38O00635 AC106822.1-201ENST00000502647 526 ntBASIC6.7□□□□□ -1.34
TRIM38O00635 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC6.7□□□□□ -1.34
TRIM38O00635 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM38O00635 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM38O00635 AC005000.1-201ENST00000536192 288 ntBASIC6.7□□□□□ -1.34
TRIM38O00635 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC6.7□□□□□ -1.34
TRIM38O00635 AC009729.1-201ENST00000548873 1133 ntBASIC6.7□□□□□ -1.34
TRIM38O00635 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM38O00635 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM38O00635 AC012414.2-201ENST00000559474 187 ntBASIC6.7□□□□□ -1.34
TRIM38O00635 MT1CP-201ENST00000567054 174 ntBASIC6.7□□□□□ -1.34
TRIM38O00635 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.7□□□□□ -1.34
TRIM38O00635 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.7□□□□□ -1.34
TRIM38O00635 AC026951.2-201ENST00000613847 241 ntBASIC6.7□□□□□ -1.34
TRIM38O00635 AC004241.2-201ENST00000614562 444 ntBASIC6.7□□□□□ -1.34
TRIM38O00635 AL445647.2-201ENST00000615170 130 ntBASIC6.7□□□□□ -1.34
TRIM38O00635 AC048344.4-201ENST00000619744 527 ntBASIC6.7□□□□□ -1.34
TRIM38O00635 AL162233.1-201ENST00000620014 944 ntBASIC6.7□□□□□ -1.34
TRIM38O00635 MIR6806-201ENST00000622141 64 ntBASIC6.7□□□□□ -1.34
TRIM38O00635 AC120057.5-201ENST00000623840 154 ntBASIC6.7□□□□□ -1.34
TRIM38O00635 AL683826.1-201ENST00000624104 627 ntBASIC6.7□□□□□ -1.34
TRIM38O00635 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM38O00635 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
TRIM38O00635 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM38O00635 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.7□□□□□ -1.34
TRIM38O00635 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM38O00635 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.7□□□□□ -1.34
TRIM38O00635 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM38O00635 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM38O00635 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM38O00635 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM38O00635 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM38O00635 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM38O00635 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM38O00635 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM38O00635 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM38O00635 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM38O00635 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM38O00635 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM38O00635 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
TRIM38O00635 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.69□□□□□ -1.34
TRIM38O00635 AC013488.1-201ENST00000526618 1838 ntBASIC6.69□□□□□ -1.34
TRIM38O00635 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM38O00635 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.69□□□□□ -1.34
TRIM38O00635 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM38O00635 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
TRIM38O00635 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
TRIM38O00635 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM38O00635 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.69□□□□□ -1.34
TRIM38O00635 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.69□□□□□ -1.34
TRIM38O00635 AC017035.1-201ENST00000411999 1115 ntBASIC6.69□□□□□ -1.34
TRIM38O00635 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.69□□□□□ -1.34
TRIM38O00635 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.69□□□□□ -1.34
TRIM38O00635 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.69□□□□□ -1.34
TRIM38O00635 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.69□□□□□ -1.34
TRIM38O00635 CCNJP1-201ENST00000450600 1149 ntBASIC6.69□□□□□ -1.34
TRIM38O00635 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.69□□□□□ -1.34
TRIM38O00635 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM38O00635 NFU1-207ENST00000462320 558 ntTSL 4 BASIC6.69□□□□□ -1.34
TRIM38O00635 AC096743.1-201ENST00000485172 319 ntBASIC6.69□□□□□ -1.34
TRIM38O00635 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.69□□□□□ -1.34
TRIM38O00635 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.69□□□□□ -1.34
TRIM38O00635 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.69□□□□□ -1.34
TRIM38O00635 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.69□□□□□ -1.34
TRIM38O00635 AC007068.2-201ENST00000543168 395 ntBASIC6.69□□□□□ -1.34
TRIM38O00635 AC005519.1-201ENST00000554490 601 ntBASIC6.69□□□□□ -1.34
TRIM38O00635 AC018558.5-201ENST00000565840 952 ntBASIC6.69□□□□□ -1.34
TRIM38O00635 AC027281.1-201ENST00000574178 758 ntBASIC6.69□□□□□ -1.34
TRIM38O00635 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.69□□□□□ -1.34
TRIM38O00635 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.69□□□□□ -1.34
TRIM38O00635 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.69□□□□□ -1.34
TRIM38O00635 AC084036.1-201ENST00000609190 508 ntBASIC6.69□□□□□ -1.34
TRIM38O00635 AL591926.1-201ENST00000620542 217 ntBASIC6.69□□□□□ -1.34
TRIM38O00635 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.69□□□□□ -1.34
TRIM38O00635 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.69□□□□□ -1.34
TRIM38O00635 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM38O00635 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms