Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC012078.1-201ENST00000405035 1646 ntBASIC6.97□□□□□ -1.29
FOXN3O00409 KYNUP2-201ENST00000582280 1329 ntBASIC6.97□□□□□ -1.29
FOXN3O00409 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
FOXN3O00409 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.96□□□□□ -1.29
FOXN3O00409 AC140479.2-201ENST00000421567 3130 ntBASIC6.96□□□□□ -1.29
FOXN3O00409 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
FOXN3O00409 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
FOXN3O00409 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
FOXN3O00409 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.29
FOXN3O00409 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
FOXN3O00409 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.3
FOXN3O00409 FANCD2P2-201ENST00000437591 1400 ntBASIC6.96□□□□□ -1.3
FOXN3O00409 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
FOXN3O00409 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.96□□□□□ -1.3
FOXN3O00409 RNU1-5P-201ENST00000362684 144 ntBASIC6.96□□□□□ -1.3
FOXN3O00409 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.96□□□□□ -1.3
FOXN3O00409 MRPS6P2-201ENST00000381143 370 ntBASIC6.96□□□□□ -1.3
FOXN3O00409 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
FOXN3O00409 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
FOXN3O00409 AL353626.3-201ENST00000413399 657 ntBASIC6.96□□□□□ -1.3
FOXN3O00409 OR52N3P-201ENST00000413417 934 ntBASIC6.96□□□□□ -1.3
FOXN3O00409 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.96□□□□□ -1.3
FOXN3O00409 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.96□□□□□ -1.3
FOXN3O00409 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6.96□□□□□ -1.3
FOXN3O00409 FAR1P1-201ENST00000427163 934 ntBASIC6.96□□□□□ -1.3
FOXN3O00409 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.96□□□□□ -1.3
FOXN3O00409 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.96□□□□□ -1.3
FOXN3O00409 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.96□□□□□ -1.3
FOXN3O00409 BMS1P11-201ENST00000442351 885 ntBASIC6.96□□□□□ -1.3
FOXN3O00409 OR52I1-201ENST00000450052 1050 ntBASIC6.96□□□□□ -1.3
FOXN3O00409 BMS1P9-201ENST00000457640 885 ntBASIC6.96□□□□□ -1.3
FOXN3O00409 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
FOXN3O00409 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
FOXN3O00409 RPS26P24-201ENST00000497656 331 ntBASIC6.96□□□□□ -1.3
FOXN3O00409 AC009567.2-201ENST00000502989 349 ntBASIC6.96□□□□□ -1.3
FOXN3O00409 AC091965.3-201ENST00000506236 208 ntBASIC6.96□□□□□ -1.3
FOXN3O00409 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.96□□□□□ -1.3
FOXN3O00409 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC6.96□□□□□ -1.3
FOXN3O00409 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.96□□□□□ -1.3
FOXN3O00409 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.96□□□□□ -1.3
FOXN3O00409 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.96□□□□□ -1.3
FOXN3O00409 AC021269.1-201ENST00000526860 705 ntBASIC6.96□□□□□ -1.3
FOXN3O00409 AC005000.1-201ENST00000536192 288 ntBASIC6.96□□□□□ -1.3
FOXN3O00409 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.96□□□□□ -1.3
FOXN3O00409 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.96□□□□□ -1.3
FOXN3O00409 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.96□□□□□ -1.3
FOXN3O00409 AC020978.7-201ENST00000575953 1187 ntBASIC6.96□□□□□ -1.3
FOXN3O00409 AC114477.1-201ENST00000605097 605 ntBASIC6.96□□□□□ -1.3
FOXN3O00409 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.96□□□□□ -1.3
FOXN3O00409 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC6.96□□□□□ -1.3
FOXN3O00409 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
FOXN3O00409 AC007671.1-201ENST00000616957 830 ntBASIC6.96□□□□□ -1.3
FOXN3O00409 U1.41-201ENST00000617626 165 ntBASIC6.96□□□□□ -1.3
FOXN3O00409 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
FOXN3O00409 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.96□□□□□ -1.3
FOXN3O00409 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.96□□□□□ -1.3
FOXN3O00409 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.96□□□□□ -1.3
FOXN3O00409 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.96□□□□□ -1.3
FOXN3O00409 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.96□□□□□ -1.3
FOXN3O00409 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
FOXN3O00409 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.95□□□□□ -1.3
FOXN3O00409 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
FOXN3O00409 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
FOXN3O00409 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
FOXN3O00409 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.95□□□□□ -1.3
FOXN3O00409 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
FOXN3O00409 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
FOXN3O00409 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
FOXN3O00409 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
FOXN3O00409 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
FOXN3O00409 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
FOXN3O00409 Y_RNA.110-201ENST00000363220 99 ntBASIC6.95□□□□□ -1.3
FOXN3O00409 RNU6-670P-201ENST00000364312 104 ntBASIC6.95□□□□□ -1.3
FOXN3O00409 RN7SKP257-201ENST00000364525 309 ntBASIC6.95□□□□□ -1.3
FOXN3O00409 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
FOXN3O00409 NACAP7-201ENST00000407371 609 ntBASIC6.95□□□□□ -1.3
FOXN3O00409 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.95□□□□□ -1.3
FOXN3O00409 NME1P1-201ENST00000420914 382 ntBASIC6.95□□□□□ -1.3
FOXN3O00409 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
FOXN3O00409 AL390879.2-203ENST00000426943 1121 ntBASIC6.95□□□□□ -1.3
FOXN3O00409 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC6.95□□□□□ -1.3
FOXN3O00409 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
FOXN3O00409 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
FOXN3O00409 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC6.95□□□□□ -1.3
FOXN3O00409 AC131392.1-201ENST00000506490 633 ntBASIC6.95□□□□□ -1.3
FOXN3O00409 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.95□□□□□ -1.3
FOXN3O00409 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.95□□□□□ -1.3
FOXN3O00409 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.95□□□□□ -1.3
FOXN3O00409 ADAD1P2-201ENST00000588476 646 ntBASIC6.95□□□□□ -1.3
FOXN3O00409 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.95□□□□□ -1.3
FOXN3O00409 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.95□□□□□ -1.3
FOXN3O00409 MIR6070-201ENST00000613967 103 ntBASIC6.95□□□□□ -1.3
FOXN3O00409 TCL6_3.1-201ENST00000619064 137 ntBASIC6.95□□□□□ -1.3
FOXN3O00409 MIR7854-201ENST00000620068 65 ntBASIC6.95□□□□□ -1.3
FOXN3O00409 OR5M2P-202ENST00000641241 4242 ntBASIC6.95□□□□□ -1.3
FOXN3O00409 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.95□□□□□ -1.3
FOXN3O00409 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
FOXN3O00409 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.95□□□□□ -1.3
FOXN3O00409 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.95□□□□□ -1.3
FOXN3O00409 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms