Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VPS29Q9UBQ0 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6□□□□□ -1.45
VPS29Q9UBQ0 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VPS29Q9UBQ0 AC093829.1-201ENST00000506662 1618 ntBASIC6□□□□□ -1.45
VPS29Q9UBQ0 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6□□□□□ -1.45
VPS29Q9UBQ0 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS29Q9UBQ0 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6□□□□□ -1.45
VPS29Q9UBQ0 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
VPS29Q9UBQ0 RN7SKP151-201ENST00000410230 316 ntBASIC6□□□□□ -1.45
VPS29Q9UBQ0 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6□□□□□ -1.45
VPS29Q9UBQ0 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6□□□□□ -1.45
VPS29Q9UBQ0 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
VPS29Q9UBQ0 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC6□□□□□ -1.45
VPS29Q9UBQ0 AC128677.1-201ENST00000436016 442 ntBASIC6□□□□□ -1.45
VPS29Q9UBQ0 PSMD8P1-201ENST00000436275 769 ntBASIC6□□□□□ -1.45
VPS29Q9UBQ0 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS29Q9UBQ0 AC016908.1-201ENST00000442571 1219 ntBASIC6□□□□□ -1.45
VPS29Q9UBQ0 AL031681.1-201ENST00000443304 400 ntBASIC6□□□□□ -1.45
VPS29Q9UBQ0 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC6□□□□□ -1.45
VPS29Q9UBQ0 RN7SL326P-201ENST00000477493 296 ntBASIC6□□□□□ -1.45
VPS29Q9UBQ0 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS29Q9UBQ0 AC114728.1-201ENST00000488289 483 ntBASIC6□□□□□ -1.45
VPS29Q9UBQ0 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS29Q9UBQ0 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6□□□□□ -1.45
VPS29Q9UBQ0 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6□□□□□ -1.45
VPS29Q9UBQ0 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS29Q9UBQ0 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6□□□□□ -1.45
VPS29Q9UBQ0 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6□□□□□ -1.45
VPS29Q9UBQ0 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6□□□□□ -1.45
VPS29Q9UBQ0 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6□□□□□ -1.45
VPS29Q9UBQ0 AC018558.5-201ENST00000565840 952 ntBASIC6□□□□□ -1.45
VPS29Q9UBQ0 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6□□□□□ -1.45
VPS29Q9UBQ0 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6□□□□□ -1.45
VPS29Q9UBQ0 AC027229.1-201ENST00000583887 253 ntBASIC6□□□□□ -1.45
VPS29Q9UBQ0 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6□□□□□ -1.45
VPS29Q9UBQ0 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
VPS29Q9UBQ0 PCA3_2.1-201ENST00000612507 409 ntBASIC6□□□□□ -1.45
VPS29Q9UBQ0 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6□□□□□ -1.45
VPS29Q9UBQ0 AL162377.2-201ENST00000624532 337 ntBASIC6□□□□□ -1.45
VPS29Q9UBQ0 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6□□□□□ -1.45
VPS29Q9UBQ0 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6□□□□□ -1.45
VPS29Q9UBQ0 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6□□□□□ -1.45
VPS29Q9UBQ0 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6□□□□□ -1.45
VPS29Q9UBQ0 HDAC1P2-201ENST00000453661 1398 ntBASIC6□□□□□ -1.45
VPS29Q9UBQ0 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
VPS29Q9UBQ0 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6□□□□□ -1.45
VPS29Q9UBQ0 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS29Q9UBQ0 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6□□□□□ -1.45
VPS29Q9UBQ0 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
VPS29Q9UBQ0 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6□□□□□ -1.45
VPS29Q9UBQ0 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS29Q9UBQ0 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 AL662795.2-201ENST00000624252 3706 ntBASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 RNA5SP485-201ENST00000365053 119 ntBASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 AL360013.1-201ENST00000419031 858 ntBASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 AC002127.1-201ENST00000421305 225 ntBASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 PPIAP32-201ENST00000449940 472 ntBASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 RPL12P31-201ENST00000478433 450 ntBASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 GM2AP2-201ENST00000491764 562 ntBASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 KHDC1P1-201ENST00000511053 508 ntBASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 AC124891.1-201ENST00000536322 519 ntBASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 AC007494.1-201ENST00000562293 760 ntBASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 AC025283.1-201ENST00000572039 734 ntBASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 DYNLL1P1-201ENST00000595442 269 ntBASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms