Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC7.25□□□□□ -1.25
SSU72Q9NP77 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC7.25□□□□□ -1.25
SSU72Q9NP77 AL021918.1-201ENST00000603933 236 ntBASIC7.25□□□□□ -1.25
SSU72Q9NP77 AC023513.1-201ENST00000604396 691 ntBASIC7.25□□□□□ -1.25
SSU72Q9NP77 AC004852.1-201ENST00000605206 154 ntBASIC7.25□□□□□ -1.25
SSU72Q9NP77 AL139286.2-201ENST00000606838 396 ntBASIC7.25□□□□□ -1.25
SSU72Q9NP77 AL135786.2-201ENST00000608422 615 ntBASIC7.25□□□□□ -1.25
SSU72Q9NP77 AL451054.3-201ENST00000611115 776 ntBASIC7.25□□□□□ -1.25
SSU72Q9NP77 AC073114.1-201ENST00000612027 490 ntBASIC7.25□□□□□ -1.25
SSU72Q9NP77 AC122133.1-201ENST00000613964 233 ntBASIC7.25□□□□□ -1.25
SSU72Q9NP77 AC108477.1-201ENST00000636764 526 ntTSL 4 BASIC7.25□□□□□ -1.25
SSU72Q9NP77 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SSU72Q9NP77 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SSU72Q9NP77 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
SSU72Q9NP77 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.25□□□□□ -1.25
SSU72Q9NP77 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SSU72Q9NP77 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
SSU72Q9NP77 AC061975.5-201ENST00000584928 1441 ntBASIC7.25□□□□□ -1.25
SSU72Q9NP77 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SSU72Q9NP77 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SSU72Q9NP77 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
SSU72Q9NP77 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC7.25□□□□□ -1.25
SSU72Q9NP77 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
SSU72Q9NP77 ANKRD20A17P-201ENST00000511745 1330 ntBASIC7.25□□□□□ -1.25
SSU72Q9NP77 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SSU72Q9NP77 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SSU72Q9NP77 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SSU72Q9NP77 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SSU72Q9NP77 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 AL596244.1-201ENST00000567068 3779 ntBASIC7.24□□□□□ -1.25
SSU72Q9NP77 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.24□□□□□ -1.25
SSU72Q9NP77 OLFM5P-201ENST00000411807 1478 ntBASIC7.24□□□□□ -1.25
SSU72Q9NP77 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
SSU72Q9NP77 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SSU72Q9NP77 HSPD1P11-201ENST00000508643 1702 ntBASIC7.24□□□□□ -1.25
SSU72Q9NP77 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
SSU72Q9NP77 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SSU72Q9NP77 AL357556.1-201ENST00000421884 1388 ntBASIC7.24□□□□□ -1.25
SSU72Q9NP77 ASNSP6-201ENST00000592770 1618 ntBASIC7.24□□□□□ -1.25
SSU72Q9NP77 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SSU72Q9NP77 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
SSU72Q9NP77 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
SSU72Q9NP77 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SSU72Q9NP77 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
SSU72Q9NP77 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 SLC25A51-201ENST00000242275 1130 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 SPIN2B-201ENST00000275988 1152 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SSU72Q9NP77 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 UBE2Q2P1-202ENST00000354771 883 ntBASIC7.24□□□□□ -1.25
SSU72Q9NP77 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SSU72Q9NP77 UCMA-201ENST00000378681 826 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SSU72Q9NP77 TRBV7-4-201ENST00000390369 347 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 TRBV7-7-201ENST00000390377 347 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 AC023141.10-201ENST00000415634 200 ntBASIC7.24□□□□□ -1.25
SSU72Q9NP77 NPM1P36-201ENST00000415681 835 ntBASIC7.24□□□□□ -1.25
SSU72Q9NP77 IYD-207ENST00000425615 684 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SSU72Q9NP77 DDX11L10-201ENST00000430178 571 ntBASIC7.24□□□□□ -1.25
SSU72Q9NP77 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 COX7BP2-201ENST00000437976 242 ntBASIC7.24□□□□□ -1.25
SSU72Q9NP77 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 HMGB3P6-201ENST00000444896 598 ntBASIC7.24□□□□□ -1.25
SSU72Q9NP77 AL389885.1-201ENST00000447227 384 ntTSL 3 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 MRPS21P1-201ENST00000453850 223 ntBASIC7.24□□□□□ -1.25
SSU72Q9NP77 PSPC1P2-201ENST00000455130 225 ntBASIC7.24□□□□□ -1.25
SSU72Q9NP77 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SSU72Q9NP77 RPSAP37-201ENST00000470913 821 ntBASIC7.24□□□□□ -1.25
SSU72Q9NP77 NAA50-206ENST00000493454 964 ntTSL 2 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 AC010424.1-201ENST00000506336 297 ntBASIC7.24□□□□□ -1.25
SSU72Q9NP77 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 AC091175.1-201ENST00000522168 572 ntBASIC7.24□□□□□ -1.25
SSU72Q9NP77 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 AC104417.1-201ENST00000523974 751 ntBASIC7.24□□□□□ -1.25
SSU72Q9NP77 OR7E96P-201ENST00000530816 976 ntBASIC7.24□□□□□ -1.25
SSU72Q9NP77 OR6M3P-201ENST00000531567 700 ntBASIC7.24□□□□□ -1.25
SSU72Q9NP77 AC012157.1-201ENST00000549725 501 ntTSL 4 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 AC133565.1-201ENST00000569218 488 ntTSL 3 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 GARSP1-201ENST00000570895 719 ntBASIC7.24□□□□□ -1.25
SSU72Q9NP77 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 CBX3P2-202ENST00000583365 535 ntBASIC7.24□□□□□ -1.25
SSU72Q9NP77 AC092653.1-201ENST00000608509 531 ntBASIC7.24□□□□□ -1.25
SSU72Q9NP77 AL445423.1-201ENST00000609941 536 ntBASIC7.24□□□□□ -1.25
SSU72Q9NP77 CT45A9-202ENST00000620704 1010 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 RBM12B-AS1-201ENST00000623283 653 ntBASIC7.24□□□□□ -1.25
SSU72Q9NP77 AC007494.3-201ENST00000624660 743 ntBASIC7.24□□□□□ -1.25
SSU72Q9NP77 AP003400.5-201ENST00000624827 617 ntBASIC7.24□□□□□ -1.25
SSU72Q9NP77 WDR11-AS1-207ENST00000630905 769 ntTSL 2 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC7.24□□□□□ -1.25
SSU72Q9NP77 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms