Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 RAB28P4-201ENST00000622233 665 ntBASIC7.62□□□□□ -1.19
UPF2Q9HAU5 AC007347.2-201ENST00000623044 180 ntBASIC7.62□□□□□ -1.19
UPF2Q9HAU5 MVP-219ENST00000629059 120 ntTSL 5 BASIC7.62□□□□□ -1.19
UPF2Q9HAU5 AC027559.1-201ENST00000636288 271 ntBASIC7.62□□□□□ -1.19
UPF2Q9HAU5 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.62□□□□□ -1.19
UPF2Q9HAU5 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC7.62□□□□□ -1.19
UPF2Q9HAU5 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC7.62□□□□□ -1.19
UPF2Q9HAU5 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
UPF2Q9HAU5 RPL31P11-201ENST00000426558 1558 ntBASIC7.62□□□□□ -1.19
UPF2Q9HAU5 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC7.62□□□□□ -1.19
UPF2Q9HAU5 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC7.62□□□□□ -1.19
UPF2Q9HAU5 AL353743.3-201ENST00000442109 1468 ntBASIC7.62□□□□□ -1.19
UPF2Q9HAU5 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
UPF2Q9HAU5 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC7.61□□□□□ -1.19
UPF2Q9HAU5 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC7.61□□□□□ -1.19
UPF2Q9HAU5 AC010132.4-201ENST00000569883 1368 ntBASIC7.61□□□□□ -1.19
UPF2Q9HAU5 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
UPF2Q9HAU5 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
UPF2Q9HAU5 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
UPF2Q9HAU5 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
UPF2Q9HAU5 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
UPF2Q9HAU5 RN7SKP17-201ENST00000411242 351 ntBASIC7.61□□□□□ -1.19
UPF2Q9HAU5 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
UPF2Q9HAU5 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
UPF2Q9HAU5 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.61□□□□□ -1.19
UPF2Q9HAU5 IGLV3-4-201ENST00000432300 244 ntBASIC7.61□□□□□ -1.19
UPF2Q9HAU5 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
UPF2Q9HAU5 RPL3P11-201ENST00000434028 1146 ntBASIC7.61□□□□□ -1.19
UPF2Q9HAU5 AL731534.1-201ENST00000434711 269 ntBASIC7.61□□□□□ -1.19
UPF2Q9HAU5 RPL5P15-201ENST00000475870 897 ntBASIC7.61□□□□□ -1.19
UPF2Q9HAU5 ENPP7P3-201ENST00000509123 241 ntBASIC7.61□□□□□ -1.19
UPF2Q9HAU5 RN7SKP196-201ENST00000516267 345 ntBASIC7.61□□□□□ -1.19
UPF2Q9HAU5 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.61□□□□□ -1.19
UPF2Q9HAU5 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.61□□□□□ -1.19
UPF2Q9HAU5 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC7.61□□□□□ -1.19
UPF2Q9HAU5 AC009729.1-201ENST00000548873 1133 ntBASIC7.61□□□□□ -1.19
UPF2Q9HAU5 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC7.61□□□□□ -1.19
UPF2Q9HAU5 AL589863.1-201ENST00000595383 631 ntBASIC7.61□□□□□ -1.19
UPF2Q9HAU5 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC7.61□□□□□ -1.19
UPF2Q9HAU5 LINC02495-203ENST00000636704 242 ntBASIC7.61□□□□□ -1.19
UPF2Q9HAU5 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
UPF2Q9HAU5 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC7.61□□□□□ -1.19
UPF2Q9HAU5 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
UPF2Q9HAU5 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
UPF2Q9HAU5 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC7.61□□□□□ -1.19
UPF2Q9HAU5 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC7.6□□□□□ -1.19
UPF2Q9HAU5 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
UPF2Q9HAU5 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC7.6□□□□□ -1.19
UPF2Q9HAU5 RNA5SP140-201ENST00000364524 92 ntBASIC7.6□□□□□ -1.19
UPF2Q9HAU5 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
UPF2Q9HAU5 EEF1GP6-201ENST00000402309 905 ntBASIC7.6□□□□□ -1.19
UPF2Q9HAU5 OR52S1P-201ENST00000427016 937 ntBASIC7.6□□□□□ -1.19
UPF2Q9HAU5 AL590399.2-201ENST00000427536 309 ntBASIC7.6□□□□□ -1.19
UPF2Q9HAU5 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC7.6□□□□□ -1.19
UPF2Q9HAU5 AC016908.1-201ENST00000442571 1219 ntBASIC7.6□□□□□ -1.19
UPF2Q9HAU5 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.6□□□□□ -1.19
UPF2Q9HAU5 PFN2-213ENST00000494827 793 ntTSL 4 BASIC7.6□□□□□ -1.19
UPF2Q9HAU5 OR6M2P-201ENST00000529831 871 ntBASIC7.6□□□□□ -1.19
UPF2Q9HAU5 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC7.6□□□□□ -1.19
UPF2Q9HAU5 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC7.6□□□□□ -1.19
UPF2Q9HAU5 TPRX1P1-201ENST00000557620 319 ntBASIC7.6□□□□□ -1.19
UPF2Q9HAU5 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.6□□□□□ -1.19
UPF2Q9HAU5 AC093388.1-201ENST00000609166 430 ntBASIC7.6□□□□□ -1.19
UPF2Q9HAU5 MIR6726-201ENST00000613751 61 ntBASIC7.6□□□□□ -1.19
UPF2Q9HAU5 AC005514.1-201ENST00000623521 208 ntBASIC7.6□□□□□ -1.19
UPF2Q9HAU5 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC7.6□□□□□ -1.19
UPF2Q9HAU5 MAPK10-350ENST00000641777 965 ntBASIC7.6□□□□□ -1.19
UPF2Q9HAU5 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
UPF2Q9HAU5 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
UPF2Q9HAU5 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
UPF2Q9HAU5 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
UPF2Q9HAU5 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
UPF2Q9HAU5 AC078880.4-201ENST00000617627 1749 ntBASIC7.6□□□□□ -1.19
UPF2Q9HAU5 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 RALGAPA1P1-201ENST00000443361 6232 ntBASIC7.59□□□□□ -1.19
UPF2Q9HAU5 SNORD35A-201ENST00000363389 86 ntBASIC7.59□□□□□ -1.19
UPF2Q9HAU5 RGS5-202ENST00000367903 934 ntTSL 3 BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 AC083855.1-201ENST00000440041 258 ntBASIC7.59□□□□□ -1.19
UPF2Q9HAU5 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 RPL10P7-201ENST00000495649 625 ntBASIC7.59□□□□□ -1.19
UPF2Q9HAU5 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 PSMC1P8-201ENST00000536820 1296 ntBASIC7.59□□□□□ -1.19
UPF2Q9HAU5 NPM1P42-201ENST00000560329 862 ntBASIC7.59□□□□□ -1.19
UPF2Q9HAU5 HNRNPA1P74-201ENST00000560782 835 ntBASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms