Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 AL596275.2-208ENST00000641192 594 ntBASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 AL163152.1-201ENST00000642001 374 ntBASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 AC005034.3-201ENST00000604845 1747 ntBASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 AL391261.1-201ENST00000555712 1479 ntBASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 AC062022.1-201ENST00000451026 1684 ntBASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 AC007114.2-201ENST00000576014 4281 ntBASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 U3.52-201ENST00000384034 216 ntBASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 AL139415.1-201ENST00000424862 352 ntBASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 Z85994.2-201ENST00000434327 452 ntBASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 AC092106.2-201ENST00000436597 487 ntBASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 MRPS21P3-201ENST00000436696 262 ntBASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 OR52Y1P-201ENST00000452418 828 ntBASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 RNU7-157P-201ENST00000459600 66 ntBASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 AC004890.1-201ENST00000461005 181 ntBASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 RPL7AP23-201ENST00000482625 776 ntBASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 AK6-203ENST00000502819 743 ntTSL 5 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 MINOS1P4-201ENST00000515470 318 ntBASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 TMF1P1-201ENST00000576058 373 ntBASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 AC067852.5-201ENST00000589299 310 ntBASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 AL136370.1-201ENST00000608166 691 ntBASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 AC012653.2-201ENST00000621880 420 ntBASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 SNX18P3-202ENST00000565670 1750 ntBASIC7.87□□□□□ -1.15
CHMP4CQ96CF2 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 AC123769.1-201ENST00000530992 3192 ntBASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 MT-RNR1-201ENST00000389680 954 ntBASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 UBBP1-201ENST00000392399 473 ntBASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 AL050305.1-201ENST00000399993 1230 ntBASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 USP9YP19-201ENST00000412165 485 ntBASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 Z82198.3-201ENST00000421145 199 ntBASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 AC106901.1-201ENST00000425086 698 ntBASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 NPM1P25-201ENST00000429734 854 ntBASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 LINC00328-2P-201ENST00000436585 219 ntBASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 AC234771.2-201ENST00000445718 597 ntBASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 AP003385.3-201ENST00000472498 287 ntBASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 AC093827.1-201ENST00000480094 861 ntBASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 TRBV8-1-201ENST00000481590 279 ntBASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 AL953862.2-201ENST00000603089 820 ntBASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 GAPDHP41-201ENST00000613707 975 ntBASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 AL354718.1-201ENST00000619764 589 ntBASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 MIR7854-201ENST00000620068 65 ntBASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms