Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RN7SL404P-201ENST00000582421 281 ntBASIC7.49□□□□□ -1.21
ERCC4Q92889 AC006116.7-201ENST00000590141 756 ntBASIC7.49□□□□□ -1.21
ERCC4Q92889 AC006116.5-201ENST00000591936 559 ntBASIC7.49□□□□□ -1.21
ERCC4Q92889 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC7.49□□□□□ -1.21
ERCC4Q92889 AC011497.2-201ENST00000600255 639 ntBASIC7.49□□□□□ -1.21
ERCC4Q92889 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC7.49□□□□□ -1.21
ERCC4Q92889 AC006328.2-201ENST00000623198 397 ntBASIC7.49□□□□□ -1.21
ERCC4Q92889 AP000770.2-201ENST00000623694 100 ntBASIC7.49□□□□□ -1.21
ERCC4Q92889 AC012005.2-201ENST00000624333 397 ntBASIC7.49□□□□□ -1.21
ERCC4Q92889 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
ERCC4Q92889 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
ERCC4Q92889 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.49□□□□□ -1.21
ERCC4Q92889 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
ERCC4Q92889 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
ERCC4Q92889 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
ERCC4Q92889 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC7.49□□□□□ -1.21
ERCC4Q92889 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC7.49□□□□□ -1.21
ERCC4Q92889 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC7.49□□□□□ -1.21
ERCC4Q92889 ZNF806-201ENST00000438300 1774 ntBASIC7.48□□□□□ -1.21
ERCC4Q92889 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.48□□□□□ -1.21
ERCC4Q92889 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
ERCC4Q92889 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC7.48□□□□□ -1.21
ERCC4Q92889 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
ERCC4Q92889 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
ERCC4Q92889 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
ERCC4Q92889 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
ERCC4Q92889 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
ERCC4Q92889 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
ERCC4Q92889 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
ERCC4Q92889 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
ERCC4Q92889 EEF1A1P16-201ENST00000325349 1414 ntBASIC7.48□□□□□ -1.21
ERCC4Q92889 AC074375.1-201ENST00000372993 192 ntBASIC7.48□□□□□ -1.21
ERCC4Q92889 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
ERCC4Q92889 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
ERCC4Q92889 AL035405.1-201ENST00000400795 710 ntBASIC7.48□□□□□ -1.21
ERCC4Q92889 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC7.48□□□□□ -1.21
ERCC4Q92889 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
ERCC4Q92889 AC023141.6-201ENST00000429418 337 ntBASIC7.48□□□□□ -1.21
ERCC4Q92889 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC7.48□□□□□ -1.21
ERCC4Q92889 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC7.48□□□□□ -1.21
ERCC4Q92889 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC7.48□□□□□ -1.21
ERCC4Q92889 AC239800.1-201ENST00000442049 719 ntBASIC7.48□□□□□ -1.21
ERCC4Q92889 PFN1P11-201ENST00000445829 389 ntBASIC7.48□□□□□ -1.21
ERCC4Q92889 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC7.48□□□□□ -1.21
ERCC4Q92889 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC7.48□□□□□ -1.21
ERCC4Q92889 MTND2P30-201ENST00000456663 382 ntBASIC7.48□□□□□ -1.21
ERCC4Q92889 PPP1R11P1-201ENST00000486095 376 ntBASIC7.48□□□□□ -1.21
ERCC4Q92889 AC093801.2-201ENST00000503966 1050 ntBASIC7.48□□□□□ -1.21
ERCC4Q92889 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.48□□□□□ -1.21
ERCC4Q92889 IGLC4-201ENST00000517690 248 ntBASIC7.48□□□□□ -1.21
ERCC4Q92889 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC7.48□□□□□ -1.21
ERCC4Q92889 AC026407.1-201ENST00000518369 204 ntBASIC7.48□□□□□ -1.21
ERCC4Q92889 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC7.48□□□□□ -1.21
ERCC4Q92889 IGLV3-6-201ENST00000523937 250 ntBASIC7.48□□□□□ -1.21
ERCC4Q92889 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC7.48□□□□□ -1.21
ERCC4Q92889 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
ERCC4Q92889 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC7.48□□□□□ -1.21
ERCC4Q92889 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC7.48□□□□□ -1.21
ERCC4Q92889 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC7.48□□□□□ -1.21
ERCC4Q92889 NQO1-205ENST00000561500 891 ntTSL 3 BASIC7.48□□□□□ -1.21
ERCC4Q92889 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC7.48□□□□□ -1.21
ERCC4Q92889 MIR5682-201ENST00000584864 76 ntBASIC7.48□□□□□ -1.21
ERCC4Q92889 AC005776.1-201ENST00000603164 290 ntBASIC7.48□□□□□ -1.21
ERCC4Q92889 ABI1P1-201ENST00000603375 1120 ntBASIC7.48□□□□□ -1.21
ERCC4Q92889 COX6CP16-201ENST00000603667 216 ntBASIC7.48□□□□□ -1.21
ERCC4Q92889 AL353807.4-201ENST00000604995 257 ntBASIC7.48□□□□□ -1.21
ERCC4Q92889 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC7.48□□□□□ -1.21
ERCC4Q92889 AC139792.1-201ENST00000607051 647 ntBASIC7.48□□□□□ -1.21
ERCC4Q92889 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC7.48□□□□□ -1.21
ERCC4Q92889 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.48□□□□□ -1.21
ERCC4Q92889 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
ERCC4Q92889 AC026367.3-201ENST00000619032 590 ntBASIC7.48□□□□□ -1.21
ERCC4Q92889 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.48□□□□□ -1.21
ERCC4Q92889 AC106782.7-201ENST00000624024 418 ntBASIC7.48□□□□□ -1.21
ERCC4Q92889 AC133555.5-201ENST00000624430 418 ntBASIC7.48□□□□□ -1.21
ERCC4Q92889 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.48□□□□□ -1.21
ERCC4Q92889 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
ERCC4Q92889 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.48□□□□□ -1.21
ERCC4Q92889 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
ERCC4Q92889 OR2A3P-202ENST00000641249 1776 ntBASIC7.48□□□□□ -1.21
ERCC4Q92889 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.48□□□□□ -1.21
ERCC4Q92889 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC7.48□□□□□ -1.21
ERCC4Q92889 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC7.48□□□□□ -1.21
ERCC4Q92889 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
ERCC4Q92889 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC4Q92889 API5P1-201ENST00000424316 1510 ntBASIC7.47□□□□□ -1.21
ERCC4Q92889 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC4Q92889 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC4Q92889 TTC41P-205ENST00000551270 3963 ntBASIC7.47□□□□□ -1.21
ERCC4Q92889 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC7.47□□□□□ -1.21
ERCC4Q92889 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC4Q92889 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
ERCC4Q92889 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC4Q92889 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC4Q92889 AC005332.9-201ENST00000620266 2921 ntBASIC7.47□□□□□ -1.21
ERCC4Q92889 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC4Q92889 RN7SKP257-201ENST00000364525 309 ntBASIC7.47□□□□□ -1.21
ERCC4Q92889 AL117344.1-201ENST00000407196 616 ntBASIC7.47□□□□□ -1.21
ERCC4Q92889 AL662791.3-201ENST00000413771 776 ntBASIC7.47□□□□□ -1.21
ERCC4Q92889 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms