Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SCXQ7RTU7 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 RNA5SP232-201ENST00000364144 119 ntBASIC4.29□□□□□ -1.72
SCXQ7RTU7 CYCSP17-201ENST00000407870 315 ntBASIC4.29□□□□□ -1.72
SCXQ7RTU7 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SCXQ7RTU7 AL139158.1-201ENST00000424719 340 ntBASIC4.29□□□□□ -1.72
SCXQ7RTU7 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 AL645939.3-201ENST00000435408 225 ntBASIC4.29□□□□□ -1.72
SCXQ7RTU7 AC092106.2-201ENST00000436597 487 ntBASIC4.29□□□□□ -1.72
SCXQ7RTU7 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SCXQ7RTU7 AL138899.2-201ENST00000439139 499 ntBASIC4.29□□□□□ -1.72
SCXQ7RTU7 H3F3BP1-201ENST00000440551 403 ntBASIC4.29□□□□□ -1.72
SCXQ7RTU7 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 EEF1B2P3-201ENST00000447718 678 ntBASIC4.29□□□□□ -1.72
SCXQ7RTU7 AL034399.1-201ENST00000451535 380 ntBASIC4.29□□□□□ -1.72
SCXQ7RTU7 AC135721.2-201ENST00000464237 300 ntBASIC4.29□□□□□ -1.72
SCXQ7RTU7 RN7SL413P-201ENST00000482700 297 ntBASIC4.29□□□□□ -1.72
SCXQ7RTU7 RPL17P2-201ENST00000491913 451 ntBASIC4.29□□□□□ -1.72
SCXQ7RTU7 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 GUSBP9-201ENST00000510138 584 ntBASIC4.29□□□□□ -1.72
SCXQ7RTU7 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 SETP21-201ENST00000514799 892 ntBASIC4.29□□□□□ -1.72
SCXQ7RTU7 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 SUMO2P19-201ENST00000518920 295 ntBASIC4.29□□□□□ -1.72
SCXQ7RTU7 EEF1B2P2-201ENST00000519625 676 ntBASIC4.29□□□□□ -1.72
SCXQ7RTU7 BCAS2P1-201ENST00000528022 632 ntBASIC4.29□□□□□ -1.72
SCXQ7RTU7 OR4A41P-201ENST00000533053 928 ntBASIC4.29□□□□□ -1.72
SCXQ7RTU7 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 MIR4301-201ENST00000577203 66 ntBASIC4.29□□□□□ -1.72
SCXQ7RTU7 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 AC012368.3-201ENST00000604190 219 ntBASIC4.29□□□□□ -1.72
SCXQ7RTU7 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 RAB28P4-201ENST00000622233 665 ntBASIC4.29□□□□□ -1.72
SCXQ7RTU7 AL035425.4-201ENST00000624509 1063 ntBASIC4.29□□□□□ -1.72
SCXQ7RTU7 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SCXQ7RTU7 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SCXQ7RTU7 AC020658.2-201ENST00000559030 4020 ntBASIC4.29□□□□□ -1.72
SCXQ7RTU7 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SCXQ7RTU7 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 DOCK11P1-201ENST00000553480 5932 ntBASIC4.29□□□□□ -1.72
SCXQ7RTU7 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SCXQ7RTU7 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SCXQ7RTU7 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SCXQ7RTU7 BRAFP1-201ENST00000445336 2703 ntBASIC4.29□□□□□ -1.72
SCXQ7RTU7 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SCXQ7RTU7 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SCXQ7RTU7 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 FTO-215ENST00000636491 1676 ntTSL 5 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SCXQ7RTU7 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 AC062029.1-202ENST00000606164 3651 ntBASIC4.28□□□□□ -1.72
SCXQ7RTU7 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SCXQ7RTU7 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SCXQ7RTU7 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SCXQ7RTU7 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SCXQ7RTU7 AL359694.2-201ENST00000567753 1615 ntBASIC4.28□□□□□ -1.72
SCXQ7RTU7 AP005139.1-201ENST00000580702 1647 ntBASIC4.28□□□□□ -1.72
SCXQ7RTU7 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 MAPK10-379ENST00000642013 1385 ntBASIC4.28□□□□□ -1.72
SCXQ7RTU7 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SCXQ7RTU7 ICE2P1-201ENST00000512800 1849 ntBASIC4.28□□□□□ -1.72
SCXQ7RTU7 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SCXQ7RTU7 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
SCXQ7RTU7 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SCXQ7RTU7 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SCXQ7RTU7 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SCXQ7RTU7 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms