Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.37□□□□□ -1.23
GABPAQ06546 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC7.37□□□□□ -1.23
GABPAQ06546 RNA5SP350-201ENST00000363298 111 ntBASIC7.37□□□□□ -1.23
GABPAQ06546 RPL6P30-201ENST00000443382 862 ntBASIC7.37□□□□□ -1.23
GABPAQ06546 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.37□□□□□ -1.23
GABPAQ06546 AC002553.3-201ENST00000453002 341 ntBASIC7.37□□□□□ -1.23
GABPAQ06546 AC016724.1-201ENST00000453215 421 ntBASIC7.37□□□□□ -1.23
GABPAQ06546 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.37□□□□□ -1.23
GABPAQ06546 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.37□□□□□ -1.23
GABPAQ06546 CR383658.1-201ENST00000514609 734 ntBASIC7.37□□□□□ -1.23
GABPAQ06546 AC027369.2-201ENST00000528030 440 ntBASIC7.37□□□□□ -1.23
GABPAQ06546 AC079905.1-201ENST00000549280 475 ntBASIC7.37□□□□□ -1.23
GABPAQ06546 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC7.37□□□□□ -1.23
GABPAQ06546 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC7.37□□□□□ -1.23
GABPAQ06546 OR7A1P-201ENST00000601206 970 ntBASIC7.37□□□□□ -1.23
GABPAQ06546 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC7.37□□□□□ -1.23
GABPAQ06546 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.37□□□□□ -1.23
GABPAQ06546 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC7.37□□□□□ -1.23
GABPAQ06546 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
GABPAQ06546 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
GABPAQ06546 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
GABPAQ06546 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
GABPAQ06546 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
GABPAQ06546 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
GABPAQ06546 CDY3P-201ENST00000454543 1618 ntBASIC7.37□□□□□ -1.23
GABPAQ06546 AP002370.1-201ENST00000528055 1602 ntBASIC7.37□□□□□ -1.23
GABPAQ06546 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
GABPAQ06546 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
GABPAQ06546 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
GABPAQ06546 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
GABPAQ06546 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC7.37□□□□□ -1.23
GABPAQ06546 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
GABPAQ06546 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.36□□□□□ -1.23
GABPAQ06546 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
GABPAQ06546 CYP2G2P-201ENST00000594920 1485 ntBASIC7.36□□□□□ -1.23
GABPAQ06546 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
GABPAQ06546 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
GABPAQ06546 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
GABPAQ06546 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.36□□□□□ -1.23
GABPAQ06546 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
GABPAQ06546 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
GABPAQ06546 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
GABPAQ06546 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
GABPAQ06546 AC010401.2-201ENST00000575137 4934 ntBASIC7.36□□□□□ -1.23
GABPAQ06546 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
GABPAQ06546 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
GABPAQ06546 LCN1P2-201ENST00000372030 223 ntBASIC7.36□□□□□ -1.23
GABPAQ06546 AC066692.1-201ENST00000421721 457 ntBASIC7.36□□□□□ -1.23
GABPAQ06546 AL389925.1-201ENST00000432257 728 ntBASIC7.36□□□□□ -1.23
GABPAQ06546 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC7.36□□□□□ -1.23
GABPAQ06546 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
GABPAQ06546 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC7.36□□□□□ -1.23
GABPAQ06546 VN1R38P-201ENST00000450265 887 ntBASIC7.36□□□□□ -1.23
GABPAQ06546 AC023194.2-201ENST00000465398 406 ntBASIC7.36□□□□□ -1.23
GABPAQ06546 AC025458.1-201ENST00000506046 166 ntBASIC7.36□□□□□ -1.23
GABPAQ06546 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.36□□□□□ -1.23
GABPAQ06546 PRMT5P1-201ENST00000514351 598 ntBASIC7.36□□□□□ -1.23
GABPAQ06546 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.36□□□□□ -1.23
GABPAQ06546 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.36□□□□□ -1.23
GABPAQ06546 RNA5SP340-201ENST00000517132 107 ntBASIC7.36□□□□□ -1.23
GABPAQ06546 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.36□□□□□ -1.23
GABPAQ06546 FAU-203ENST00000525297 355 ntTSL 5 BASIC7.36□□□□□ -1.23
GABPAQ06546 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
GABPAQ06546 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC7.36□□□□□ -1.23
GABPAQ06546 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.36□□□□□ -1.23
GABPAQ06546 AC233702.7-202ENST00000582941 211 ntBASIC7.36□□□□□ -1.23
GABPAQ06546 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC7.36□□□□□ -1.23
GABPAQ06546 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.36□□□□□ -1.23
GABPAQ06546 AL138895.2-201ENST00000603019 178 ntBASIC7.36□□□□□ -1.23
GABPAQ06546 AC073333.2-201ENST00000603589 769 ntBASIC7.36□□□□□ -1.23
GABPAQ06546 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
GABPAQ06546 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.36□□□□□ -1.23
GABPAQ06546 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
GABPAQ06546 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
GABPAQ06546 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
GABPAQ06546 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
GABPAQ06546 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
GABPAQ06546 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.35□□□□□ -1.23
GABPAQ06546 AC011416.1-201ENST00000514947 1732 ntBASIC7.35□□□□□ -1.23
GABPAQ06546 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
GABPAQ06546 AC092821.2-201ENST00000545710 2042 ntBASIC7.35□□□□□ -1.23
GABPAQ06546 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
GABPAQ06546 AC092725.2-201ENST00000567658 1389 ntBASIC7.35□□□□□ -1.23
GABPAQ06546 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
GABPAQ06546 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
GABPAQ06546 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
GABPAQ06546 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
GABPAQ06546 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
GABPAQ06546 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
GABPAQ06546 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
GABPAQ06546 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
GABPAQ06546 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC7.35□□□□□ -1.23
GABPAQ06546 OR11H13P-201ENST00000359695 979 ntBASIC7.35□□□□□ -1.23
GABPAQ06546 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.35□□□□□ -1.23
GABPAQ06546 AL096711.1-201ENST00000404780 554 ntBASIC7.35□□□□□ -1.23
GABPAQ06546 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC7.35□□□□□ -1.23
GABPAQ06546 CYP4F30P-202ENST00000420048 405 ntBASIC7.35□□□□□ -1.23
GABPAQ06546 OR3D1P-201ENST00000438288 955 ntBASIC7.35□□□□□ -1.23
GABPAQ06546 ATP6V1E1P1-201ENST00000439215 681 ntBASIC7.35□□□□□ -1.23
GABPAQ06546 AC011742.2-201ENST00000443818 352 ntBASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms