Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CCL20P78556 RNU6-316P-201ENST00000391027 107 ntBASIC4.82□□□□□ -1.64
CCL20P78556 RN7SKP281-201ENST00000410472 352 ntBASIC4.82□□□□□ -1.64
CCL20P78556 BX119904.3-201ENST00000428194 957 ntBASIC4.82□□□□□ -1.64
CCL20P78556 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC4.82□□□□□ -1.64
CCL20P78556 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC4.82□□□□□ -1.64
CCL20P78556 MED28P4-201ENST00000433137 572 ntBASIC4.82□□□□□ -1.64
CCL20P78556 AC009518.3-201ENST00000438972 253 ntBASIC4.82□□□□□ -1.64
CCL20P78556 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCL20P78556 RAB28P2-201ENST00000454299 641 ntBASIC4.82□□□□□ -1.64
CCL20P78556 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC4.82□□□□□ -1.64
CCL20P78556 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCL20P78556 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC4.82□□□□□ -1.64
CCL20P78556 RPSAP51-201ENST00000497462 645 ntBASIC4.82□□□□□ -1.64
CCL20P78556 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC4.82□□□□□ -1.64
CCL20P78556 LINC02162-201ENST00000512521 574 ntTSL 4 BASIC4.82□□□□□ -1.64
CCL20P78556 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC4.82□□□□□ -1.64
CCL20P78556 IGHVIII-25-1-201ENST00000522143 241 ntBASIC4.82□□□□□ -1.64
CCL20P78556 IGKV2OR22-4-201ENST00000523309 367 ntBASIC4.82□□□□□ -1.64
CCL20P78556 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC4.82□□□□□ -1.64
CCL20P78556 SETP17-201ENST00000534163 817 ntBASIC4.82□□□□□ -1.64
CCL20P78556 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC4.82□□□□□ -1.64
CCL20P78556 AL049869.4-201ENST00000555669 178 ntBASIC4.82□□□□□ -1.64
CCL20P78556 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.82□□□□□ -1.64
CCL20P78556 RNU4ATAC-201ENST00000580972 127 ntBASIC4.82□□□□□ -1.64
CCL20P78556 AP001120.4-201ENST00000590231 108 ntBASIC4.82□□□□□ -1.64
CCL20P78556 AC091133.5-201ENST00000603088 301 ntBASIC4.82□□□□□ -1.64
CCL20P78556 SNORD96A-201ENST00000606577 79 ntBASIC4.82□□□□□ -1.64
CCL20P78556 AC012640.3-201ENST00000607847 430 ntBASIC4.82□□□□□ -1.64
CCL20P78556 AL136097.3-201ENST00000611097 505 ntBASIC4.82□□□□□ -1.64
CCL20P78556 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC4.82□□□□□ -1.64
CCL20P78556 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC4.82□□□□□ -1.64
CCL20P78556 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC4.82□□□□□ -1.64
CCL20P78556 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
CCL20P78556 OR7A1P-202ENST00000641542 1158 ntBASIC4.82□□□□□ -1.64
CCL20P78556 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCL20P78556 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC4.82□□□□□ -1.64
CCL20P78556 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCL20P78556 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCL20P78556 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CCL20P78556 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCL20P78556 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CCL20P78556 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.82□□□□□ -1.64
CCL20P78556 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCL20P78556 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC4.82□□□□□ -1.64
CCL20P78556 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCL20P78556 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC4.82□□□□□ -1.64
CCL20P78556 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.82□□□□□ -1.64
CCL20P78556 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCL20P78556 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCL20P78556 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCL20P78556 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCL20P78556 AL353743.3-201ENST00000442109 1468 ntBASIC4.81□□□□□ -1.64
CCL20P78556 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC4.81□□□□□ -1.64
CCL20P78556 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCL20P78556 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCL20P78556 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CCL20P78556 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCL20P78556 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCL20P78556 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CCL20P78556 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCL20P78556 AL359091.1-201ENST00000449048 1734 ntBASIC4.81□□□□□ -1.64
CCL20P78556 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCL20P78556 EEF1A1P30-201ENST00000429708 1315 ntBASIC4.81□□□□□ -1.64
CCL20P78556 FCGR3B-204ENST00000531221 1339 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCL20P78556 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCL20P78556 AC016583.1-201ENST00000624221 2431 ntBASIC4.81□□□□□ -1.64
CCL20P78556 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCL20P78556 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCL20P78556 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCL20P78556 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCL20P78556 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCL20P78556 MIR197-201ENST00000384976 75 ntBASIC4.81□□□□□ -1.64
CCL20P78556 SNORA35-201ENST00000386104 128 ntBASIC4.81□□□□□ -1.64
CCL20P78556 AC087752.1-201ENST00000391360 558 ntBASIC4.81□□□□□ -1.64
CCL20P78556 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CCL20P78556 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC4.81□□□□□ -1.64
CCL20P78556 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.81□□□□□ -1.64
CCL20P78556 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCL20P78556 PPIL1P1-201ENST00000423936 499 ntBASIC4.81□□□□□ -1.64
CCL20P78556 AL157884.1-201ENST00000424561 454 ntBASIC4.81□□□□□ -1.64
CCL20P78556 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC4.81□□□□□ -1.64
CCL20P78556 VDAC2P3-201ENST00000430995 828 ntBASIC4.81□□□□□ -1.64
CCL20P78556 AC016908.1-201ENST00000442571 1219 ntBASIC4.81□□□□□ -1.64
CCL20P78556 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.81□□□□□ -1.64
CCL20P78556 EFCAB2-207ENST00000447569 527 ntTSL 2 BASIC4.81□□□□□ -1.64
CCL20P78556 HSPA8P3-201ENST00000449300 780 ntBASIC4.81□□□□□ -1.64
CCL20P78556 RSU1P1-201ENST00000453416 441 ntBASIC4.81□□□□□ -1.64
CCL20P78556 RPL12P39-201ENST00000455456 496 ntBASIC4.81□□□□□ -1.64
CCL20P78556 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC4.81□□□□□ -1.64
CCL20P78556 RN7SL352P-201ENST00000466002 277 ntBASIC4.81□□□□□ -1.64
CCL20P78556 AL135933.1-201ENST00000498657 802 ntBASIC4.81□□□□□ -1.64
CCL20P78556 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC4.81□□□□□ -1.64
CCL20P78556 AC010442.1-201ENST00000515583 816 ntBASIC4.81□□□□□ -1.64
CCL20P78556 CASC11-203ENST00000519071 791 ntTSL 3 BASIC4.81□□□□□ -1.64
CCL20P78556 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC4.81□□□□□ -1.64
CCL20P78556 OR7E1P-201ENST00000533891 958 ntBASIC4.81□□□□□ -1.64
CCL20P78556 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC4.81□□□□□ -1.64
CCL20P78556 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCL20P78556 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms