Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.79□□□□□ -1.32
HDAC4P56524 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.79□□□□□ -1.32
HDAC4P56524 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.79□□□□□ -1.32
HDAC4P56524 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HDAC4P56524 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.79□□□□□ -1.32
HDAC4P56524 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.79□□□□□ -1.32
HDAC4P56524 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.79□□□□□ -1.32
HDAC4P56524 AC092718.4-201ENST00000566639 716 ntBASIC6.79□□□□□ -1.32
HDAC4P56524 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.79□□□□□ -1.32
HDAC4P56524 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.79□□□□□ -1.32
HDAC4P56524 AC012175.1-201ENST00000603755 531 ntBASIC6.79□□□□□ -1.32
HDAC4P56524 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.79□□□□□ -1.32
HDAC4P56524 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.79□□□□□ -1.32
HDAC4P56524 U1.41-201ENST00000617626 165 ntBASIC6.79□□□□□ -1.32
HDAC4P56524 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
HDAC4P56524 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.79□□□□□ -1.32
HDAC4P56524 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.79□□□□□ -1.32
HDAC4P56524 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.79□□□□□ -1.32
HDAC4P56524 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.79□□□□□ -1.32
HDAC4P56524 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
HDAC4P56524 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
HDAC4P56524 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.79□□□□□ -1.32
HDAC4P56524 TET1P1-201ENST00000426627 2301 ntBASIC6.79□□□□□ -1.32
HDAC4P56524 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HDAC4P56524 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HDAC4P56524 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HDAC4P56524 AC022034.1-201ENST00000512867 2156 ntBASIC6.79□□□□□ -1.32
HDAC4P56524 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
HDAC4P56524 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.79□□□□□ -1.32
HDAC4P56524 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.79□□□□□ -1.32
HDAC4P56524 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.79□□□□□ -1.32
HDAC4P56524 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.79□□□□□ -1.32
HDAC4P56524 AL731556.1-201ENST00000394628 3711 ntBASIC6.78□□□□□ -1.32
HDAC4P56524 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.78□□□□□ -1.32
HDAC4P56524 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.78□□□□□ -1.32
HDAC4P56524 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.78□□□□□ -1.32
HDAC4P56524 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
HDAC4P56524 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HDAC4P56524 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.78□□□□□ -1.32
HDAC4P56524 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.78□□□□□ -1.32
HDAC4P56524 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HDAC4P56524 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.78□□□□□ -1.32
HDAC4P56524 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
HDAC4P56524 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.78□□□□□ -1.32
HDAC4P56524 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
HDAC4P56524 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
HDAC4P56524 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
HDAC4P56524 RNA5SP333-201ENST00000363466 118 ntBASIC6.78□□□□□ -1.32
HDAC4P56524 RNA5SP334-201ENST00000364825 118 ntBASIC6.78□□□□□ -1.32
HDAC4P56524 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
HDAC4P56524 SNORA81-201ENST00000408493 178 ntBASIC6.78□□□□□ -1.32
HDAC4P56524 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.78□□□□□ -1.32
HDAC4P56524 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HDAC4P56524 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.78□□□□□ -1.32
HDAC4P56524 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC6.78□□□□□ -1.32
HDAC4P56524 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.78□□□□□ -1.32
HDAC4P56524 RPL24P2-201ENST00000421023 475 ntBASIC6.78□□□□□ -1.32
HDAC4P56524 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
HDAC4P56524 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.78□□□□□ -1.32
HDAC4P56524 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.78□□□□□ -1.32
HDAC4P56524 GAPDHP37-201ENST00000442317 968 ntBASIC6.78□□□□□ -1.32
HDAC4P56524 WDR82P2-201ENST00000444540 928 ntBASIC6.78□□□□□ -1.32
HDAC4P56524 AP003385.3-201ENST00000472498 287 ntBASIC6.78□□□□□ -1.32
HDAC4P56524 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.78□□□□□ -1.32
HDAC4P56524 AC114324.2-202ENST00000503812 134 ntBASIC6.78□□□□□ -1.32
HDAC4P56524 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC6.78□□□□□ -1.32
HDAC4P56524 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.78□□□□□ -1.32
HDAC4P56524 AC084337.1-201ENST00000524809 686 ntBASIC6.78□□□□□ -1.32
HDAC4P56524 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.78□□□□□ -1.32
HDAC4P56524 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
HDAC4P56524 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
HDAC4P56524 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.78□□□□□ -1.32
HDAC4P56524 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.78□□□□□ -1.32
HDAC4P56524 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.78□□□□□ -1.32
HDAC4P56524 AC004805.3-201ENST00000603178 310 ntBASIC6.78□□□□□ -1.32
HDAC4P56524 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.78□□□□□ -1.32
HDAC4P56524 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
HDAC4P56524 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
HDAC4P56524 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
HDAC4P56524 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.78□□□□□ -1.32
HDAC4P56524 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.78□□□□□ -1.32
HDAC4P56524 AC009779.8-201ENST00000641684 4384 ntBASIC6.78□□□□□ -1.32
HDAC4P56524 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
HDAC4P56524 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HDAC4P56524 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.32
HDAC4P56524 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
HDAC4P56524 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
HDAC4P56524 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HDAC4P56524 AC018628.1-201ENST00000624147 3819 ntBASIC6.77□□□□□ -1.33
HDAC4P56524 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.77□□□□□ -1.33
HDAC4P56524 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HDAC4P56524 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
HDAC4P56524 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
HDAC4P56524 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HDAC4P56524 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HDAC4P56524 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
HDAC4P56524 AL033519.1-201ENST00000407266 307 ntBASIC6.77□□□□□ -1.33
HDAC4P56524 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.77□□□□□ -1.33
HDAC4P56524 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
HDAC4P56524 AC083862.1-201ENST00000427378 1242 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms