Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SNORA81.2-201ENST00000516868 170 ntBASIC6.22□□□□□ -1.41
CDH13P55290 RN7SKP5-201ENST00000517045 272 ntBASIC6.22□□□□□ -1.41
CDH13P55290 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.22□□□□□ -1.41
CDH13P55290 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
CDH13P55290 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.22□□□□□ -1.41
CDH13P55290 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.22□□□□□ -1.41
CDH13P55290 AC103855.4-201ENST00000533158 265 ntBASIC6.22□□□□□ -1.41
CDH13P55290 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.22□□□□□ -1.41
CDH13P55290 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CDH13P55290 AC089984.3-201ENST00000552838 363 ntBASIC6.22□□□□□ -1.41
CDH13P55290 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC6.22□□□□□ -1.41
CDH13P55290 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.22□□□□□ -1.41
CDH13P55290 AC087468.1-201ENST00000604365 630 ntBASIC6.22□□□□□ -1.41
CDH13P55290 AL049840.6-201ENST00000604583 345 ntBASIC6.22□□□□□ -1.41
CDH13P55290 AC114477.1-201ENST00000605097 605 ntBASIC6.22□□□□□ -1.41
CDH13P55290 AL512413.1-201ENST00000606489 382 ntBASIC6.22□□□□□ -1.41
CDH13P55290 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CDH13P55290 MIR6849-201ENST00000618543 69 ntBASIC6.22□□□□□ -1.41
CDH13P55290 MIR7854-201ENST00000620068 65 ntBASIC6.22□□□□□ -1.41
CDH13P55290 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDH13P55290 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.22□□□□□ -1.41
CDH13P55290 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.22□□□□□ -1.41
CDH13P55290 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.22□□□□□ -1.41
CDH13P55290 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CDH13P55290 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CDH13P55290 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.22□□□□□ -1.41
CDH13P55290 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.22□□□□□ -1.41
CDH13P55290 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDH13P55290 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.22□□□□□ -1.41
CDH13P55290 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDH13P55290 AL353743.3-201ENST00000442109 1468 ntBASIC6.22□□□□□ -1.41
CDH13P55290 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CDH13P55290 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CDH13P55290 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
CDH13P55290 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
CDH13P55290 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDH13P55290 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDH13P55290 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.21□□□□□ -1.42
CDH13P55290 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CDH13P55290 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDH13P55290 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDH13P55290 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CDH13P55290 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CDH13P55290 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CDH13P55290 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDH13P55290 RNA5SP308-201ENST00000362532 115 ntBASIC6.21□□□□□ -1.42
CDH13P55290 AL451046.1-201ENST00000406097 534 ntBASIC6.21□□□□□ -1.42
CDH13P55290 AL022237.1-201ENST00000446663 358 ntBASIC6.21□□□□□ -1.42
CDH13P55290 AL354872.1-201ENST00000456361 967 ntBASIC6.21□□□□□ -1.42
CDH13P55290 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.21□□□□□ -1.42
CDH13P55290 RN7SL221P-201ENST00000466190 281 ntBASIC6.21□□□□□ -1.42
CDH13P55290 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.21□□□□□ -1.42
CDH13P55290 AC106800.3-201ENST00000511389 308 ntBASIC6.21□□□□□ -1.42
CDH13P55290 AC134698.1-201ENST00000511619 643 ntBASIC6.21□□□□□ -1.42
CDH13P55290 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.21□□□□□ -1.42
CDH13P55290 SNORD116-30-201ENST00000516468 85 ntBASIC6.21□□□□□ -1.42
CDH13P55290 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.21□□□□□ -1.42
CDH13P55290 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.21□□□□□ -1.42
CDH13P55290 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.21□□□□□ -1.42
CDH13P55290 AP001804.1-201ENST00000526868 919 ntBASIC6.21□□□□□ -1.42
CDH13P55290 OR4A6P-201ENST00000534364 970 ntBASIC6.21□□□□□ -1.42
CDH13P55290 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.21□□□□□ -1.42
CDH13P55290 OR4H6P-201ENST00000563771 921 ntBASIC6.21□□□□□ -1.42
CDH13P55290 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.21□□□□□ -1.42
CDH13P55290 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.21□□□□□ -1.42
CDH13P55290 AC074141.1-201ENST00000588129 2995 ntBASIC6.21□□□□□ -1.42
CDH13P55290 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.21□□□□□ -1.42
CDH13P55290 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC6.21□□□□□ -1.42
CDH13P55290 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.21□□□□□ -1.42
CDH13P55290 AL352984.2-201ENST00000611153 546 ntBASIC6.21□□□□□ -1.42
CDH13P55290 AC135068.11-201ENST00000636378 921 ntBASIC6.21□□□□□ -1.42
CDH13P55290 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CDH13P55290 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.21□□□□□ -1.42
CDH13P55290 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDH13P55290 AC004023.1-201ENST00000561473 1744 ntBASIC6.21□□□□□ -1.42
CDH13P55290 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDH13P55290 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.21□□□□□ -1.42
CDH13P55290 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDH13P55290 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
CDH13P55290 AC007159.1-201ENST00000566529 4706 ntBASIC6.21□□□□□ -1.42
CDH13P55290 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.21□□□□□ -1.42
CDH13P55290 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDH13P55290 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CDH13P55290 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDH13P55290 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDH13P55290 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.2□□□□□ -1.42
CDH13P55290 AOX3P-204ENST00000491025 2107 ntBASIC6.2□□□□□ -1.42
CDH13P55290 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
CDH13P55290 AC005725.1-201ENST00000577346 2607 ntBASIC6.2□□□□□ -1.42
CDH13P55290 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
CDH13P55290 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH13P55290 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDH13P55290 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDH13P55290 RNF19BPY-201ENST00000458209 1550 ntBASIC6.2□□□□□ -1.42
CDH13P55290 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDH13P55290 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
CDH13P55290 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH13P55290 MIR27A-201ENST00000385073 78 ntBASIC6.2□□□□□ -1.42
CDH13P55290 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.2□□□□□ -1.42
CDH13P55290 RPS20P25-201ENST00000412447 352 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms