Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.87□□□□□ -1.31
COPAP53621 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
COPAP53621 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COPAP53621 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.87□□□□□ -1.31
COPAP53621 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.87□□□□□ -1.31
COPAP53621 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COPAP53621 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COPAP53621 SNORA70D-201ENST00000578836 135 ntBASIC6.87□□□□□ -1.31
COPAP53621 AC087575.1-201ENST00000585087 229 ntBASIC6.87□□□□□ -1.31
COPAP53621 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.87□□□□□ -1.31
COPAP53621 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.87□□□□□ -1.31
COPAP53621 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.87□□□□□ -1.31
COPAP53621 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.87□□□□□ -1.31
COPAP53621 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COPAP53621 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
COPAP53621 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.87□□□□□ -1.31
COPAP53621 LCOR-201ENST00000286067 4542 ntBASIC6.87□□□□□ -1.31
COPAP53621 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COPAP53621 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.87□□□□□ -1.31
COPAP53621 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
COPAP53621 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
COPAP53621 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COPAP53621 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COPAP53621 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COPAP53621 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.86□□□□□ -1.31
COPAP53621 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.86□□□□□ -1.31
COPAP53621 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COPAP53621 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COPAP53621 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
COPAP53621 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.86□□□□□ -1.31
COPAP53621 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COPAP53621 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.86□□□□□ -1.31
COPAP53621 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.86□□□□□ -1.31
COPAP53621 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COPAP53621 ZNF658B-201ENST00000602828 3408 ntBASIC6.86□□□□□ -1.31
COPAP53621 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.86□□□□□ -1.31
COPAP53621 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
COPAP53621 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
COPAP53621 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
COPAP53621 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COPAP53621 RNA5SP333-201ENST00000363466 118 ntBASIC6.86□□□□□ -1.31
COPAP53621 RNA5SP140-201ENST00000364524 92 ntBASIC6.86□□□□□ -1.31
COPAP53621 RNA5SP334-201ENST00000364825 118 ntBASIC6.86□□□□□ -1.31
COPAP53621 AL139039.2-201ENST00000407436 479 ntBASIC6.86□□□□□ -1.31
COPAP53621 RN7SKP271-201ENST00000410528 320 ntBASIC6.86□□□□□ -1.31
COPAP53621 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.86□□□□□ -1.31
COPAP53621 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC6.86□□□□□ -1.31
COPAP53621 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
COPAP53621 MTCO1P57-201ENST00000432182 261 ntBASIC6.86□□□□□ -1.31
COPAP53621 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.86□□□□□ -1.31
COPAP53621 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.86□□□□□ -1.31
COPAP53621 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COPAP53621 AL451063.1-201ENST00000450164 1133 ntBASIC6.86□□□□□ -1.31
COPAP53621 AC019084.1-201ENST00000457337 432 ntBASIC6.86□□□□□ -1.31
COPAP53621 RN7SL168P-201ENST00000463821 279 ntBASIC6.86□□□□□ -1.31
COPAP53621 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.86□□□□□ -1.31
COPAP53621 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
COPAP53621 EEF1B2P2-201ENST00000519625 676 ntBASIC6.86□□□□□ -1.31
COPAP53621 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.86□□□□□ -1.31
COPAP53621 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.86□□□□□ -1.31
COPAP53621 EIF4A2P3-201ENST00000525903 1055 ntBASIC6.86□□□□□ -1.31
COPAP53621 SNRPCP6-201ENST00000528310 210 ntBASIC6.86□□□□□ -1.31
COPAP53621 OR4A21P-201ENST00000532759 944 ntBASIC6.86□□□□□ -1.31
COPAP53621 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC6.86□□□□□ -1.31
COPAP53621 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.86□□□□□ -1.31
COPAP53621 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.86□□□□□ -1.31
COPAP53621 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
COPAP53621 AC090079.2-201ENST00000575289 768 ntBASIC6.86□□□□□ -1.31
COPAP53621 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.86□□□□□ -1.31
COPAP53621 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.86□□□□□ -1.31
COPAP53621 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.86□□□□□ -1.31
COPAP53621 VN1R81P-201ENST00000602085 372 ntBASIC6.86□□□□□ -1.31
COPAP53621 AC111186.1-201ENST00000604684 130 ntBASIC6.86□□□□□ -1.31
COPAP53621 AC004241.2-201ENST00000614562 444 ntBASIC6.86□□□□□ -1.31
COPAP53621 RAB28P4-201ENST00000622233 665 ntBASIC6.86□□□□□ -1.31
COPAP53621 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.86□□□□□ -1.31
COPAP53621 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
COPAP53621 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.86□□□□□ -1.31
COPAP53621 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
COPAP53621 AC010329.1-201ENST00000593903 8328 ntBASIC6.86□□□□□ -1.31
COPAP53621 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.86□□□□□ -1.31
COPAP53621 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COPAP53621 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
COPAP53621 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
COPAP53621 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COPAP53621 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.85□□□□□ -1.31
COPAP53621 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.85□□□□□ -1.31
COPAP53621 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
COPAP53621 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.85□□□□□ -1.31
COPAP53621 AC022905.1-201ENST00000503430 3048 ntBASIC6.85□□□□□ -1.31
COPAP53621 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COPAP53621 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.85□□□□□ -1.31
COPAP53621 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COPAP53621 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
COPAP53621 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.85□□□□□ -1.31
COPAP53621 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COPAP53621 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
COPAP53621 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COPAP53621 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
COPAP53621 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms