Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC090058.1-201ENST00000498788 435 ntBASIC5.59□□□□□ -1.51
UBCP0CG48 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.59□□□□□ -1.51
UBCP0CG48 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.59□□□□□ -1.51
UBCP0CG48 IGKV1D-32-201ENST00000517449 318 ntBASIC5.59□□□□□ -1.51
UBCP0CG48 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.59□□□□□ -1.51
UBCP0CG48 AP001994.1-201ENST00000527539 826 ntBASIC5.59□□□□□ -1.51
UBCP0CG48 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC5.59□□□□□ -1.51
UBCP0CG48 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
UBCP0CG48 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC5.59□□□□□ -1.51
UBCP0CG48 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.59□□□□□ -1.51
UBCP0CG48 AL139041.1-201ENST00000605480 610 ntBASIC5.59□□□□□ -1.51
UBCP0CG48 AC019257.2-201ENST00000605539 497 ntBASIC5.59□□□□□ -1.51
UBCP0CG48 RPL12P48-201ENST00000605620 304 ntBASIC5.59□□□□□ -1.51
UBCP0CG48 AC241377.1-201ENST00000619797 406 ntBASIC5.59□□□□□ -1.51
UBCP0CG48 AC022726.2-201ENST00000634673 547 ntBASIC5.59□□□□□ -1.51
UBCP0CG48 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
UBCP0CG48 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
UBCP0CG48 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.59□□□□□ -1.51
UBCP0CG48 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
UBCP0CG48 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
UBCP0CG48 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.59□□□□□ -1.51
UBCP0CG48 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
UBCP0CG48 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
UBCP0CG48 AC232271.1-201ENST00000602455 2715 ntBASIC5.59□□□□□ -1.52
UBCP0CG48 AC012078.1-201ENST00000405035 1646 ntBASIC5.59□□□□□ -1.52
UBCP0CG48 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
UBCP0CG48 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
UBCP0CG48 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.52
UBCP0CG48 AC025470.1-201ENST00000510053 2032 ntBASIC5.58□□□□□ -1.52
UBCP0CG48 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
UBCP0CG48 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
UBCP0CG48 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
UBCP0CG48 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UBCP0CG48 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
UBCP0CG48 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
UBCP0CG48 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UBCP0CG48 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.58□□□□□ -1.52
UBCP0CG48 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UBCP0CG48 AC092692.1-201ENST00000623625 2595 ntBASIC5.58□□□□□ -1.52
UBCP0CG48 PPIAP24-201ENST00000328558 471 ntBASIC5.58□□□□□ -1.52
UBCP0CG48 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UBCP0CG48 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
UBCP0CG48 MIR301B-201ENST00000390813 78 ntBASIC5.58□□□□□ -1.52
UBCP0CG48 RN7SKP117-201ENST00000410175 264 ntBASIC5.58□□□□□ -1.52
UBCP0CG48 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC5.58□□□□□ -1.52
UBCP0CG48 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.58□□□□□ -1.52
UBCP0CG48 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC5.58□□□□□ -1.52
UBCP0CG48 RPS7P4-201ENST00000444127 582 ntBASIC5.58□□□□□ -1.52
UBCP0CG48 AC092967.1-201ENST00000449016 481 ntBASIC5.58□□□□□ -1.52
UBCP0CG48 CCNJP1-201ENST00000450600 1149 ntBASIC5.58□□□□□ -1.52
UBCP0CG48 RN7SL221P-201ENST00000466190 281 ntBASIC5.58□□□□□ -1.52
UBCP0CG48 SNRPCP3-201ENST00000474888 476 ntBASIC5.58□□□□□ -1.52
UBCP0CG48 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UBCP0CG48 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.58□□□□□ -1.52
UBCP0CG48 RNA5SP400-201ENST00000517155 111 ntBASIC5.58□□□□□ -1.52
UBCP0CG48 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC5.58□□□□□ -1.52
UBCP0CG48 IGHVII-49-1-201ENST00000521760 224 ntBASIC5.58□□□□□ -1.52
UBCP0CG48 RBMS2P1-201ENST00000525031 1226 ntBASIC5.58□□□□□ -1.52
UBCP0CG48 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC5.58□□□□□ -1.52
UBCP0CG48 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC5.58□□□□□ -1.52
UBCP0CG48 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC5.58□□□□□ -1.52
UBCP0CG48 PSMC1P8-201ENST00000536820 1296 ntBASIC5.58□□□□□ -1.52
UBCP0CG48 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.58□□□□□ -1.52
UBCP0CG48 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.58□□□□□ -1.52
UBCP0CG48 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.58□□□□□ -1.52
UBCP0CG48 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.58□□□□□ -1.52
UBCP0CG48 AC090616.1-201ENST00000583895 447 ntBASIC5.58□□□□□ -1.52
UBCP0CG48 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.58□□□□□ -1.52
UBCP0CG48 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.58□□□□□ -1.52
UBCP0CG48 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC5.58□□□□□ -1.52
UBCP0CG48 SNORD96A-201ENST00000606577 79 ntBASIC5.58□□□□□ -1.52
UBCP0CG48 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC5.58□□□□□ -1.52
UBCP0CG48 MIR6085-201ENST00000618314 110 ntBASIC5.58□□□□□ -1.52
UBCP0CG48 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC5.58□□□□□ -1.52
UBCP0CG48 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.58□□□□□ -1.52
UBCP0CG48 SMG1P5-202ENST00000529428 4219 ntBASIC5.58□□□□□ -1.52
UBCP0CG48 SMG1P2-201ENST00000566127 4221 ntBASIC5.58□□□□□ -1.52
UBCP0CG48 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
UBCP0CG48 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UBCP0CG48 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UBCP0CG48 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
UBCP0CG48 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UBCP0CG48 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
UBCP0CG48 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.58□□□□□ -1.52
UBCP0CG48 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
UBCP0CG48 AC140134.1-201ENST00000511830 3544 ntBASIC5.58□□□□□ -1.52
UBCP0CG48 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
UBCP0CG48 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.58□□□□□ -1.52
UBCP0CG48 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.58□□□□□ -1.52
UBCP0CG48 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.57□□□□□ -1.52
UBCP0CG48 AC125238.2-201ENST00000430003 1440 ntBASIC5.57□□□□□ -1.52
UBCP0CG48 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
UBCP0CG48 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
UBCP0CG48 AL591135.1-201ENST00000401578 5914 ntBASIC5.57□□□□□ -1.52
UBCP0CG48 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
UBCP0CG48 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
UBCP0CG48 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
UBCP0CG48 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
UBCP0CG48 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
UBCP0CG48 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms