Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SNX3O60493 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.11□□□□□ -1.43
SNX3O60493 AP000619.2-201ENST00000546014 969 ntBASIC6.11□□□□□ -1.43
SNX3O60493 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.11□□□□□ -1.43
SNX3O60493 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.11□□□□□ -1.43
SNX3O60493 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC6.11□□□□□ -1.43
SNX3O60493 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.11□□□□□ -1.43
SNX3O60493 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
SNX3O60493 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.11□□□□□ -1.43
SNX3O60493 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC6.11□□□□□ -1.43
SNX3O60493 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC6.11□□□□□ -1.43
SNX3O60493 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.11□□□□□ -1.43
SNX3O60493 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SNX3O60493 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SNX3O60493 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
SNX3O60493 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SNX3O60493 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SNX3O60493 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SNX3O60493 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
SNX3O60493 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SNX3O60493 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SNX3O60493 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.11□□□□□ -1.43
SNX3O60493 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SNX3O60493 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
SNX3O60493 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SNX3O60493 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SNX3O60493 RN7SKP128-201ENST00000364270 303 ntBASIC6.1□□□□□ -1.43
SNX3O60493 RNA5SP302-201ENST00000364896 100 ntBASIC6.1□□□□□ -1.43
SNX3O60493 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
SNX3O60493 RN7SKP268-201ENST00000411107 316 ntBASIC6.1□□□□□ -1.43
SNX3O60493 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SNX3O60493 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.1□□□□□ -1.43
SNX3O60493 AC093107.1-201ENST00000422772 609 ntBASIC6.1□□□□□ -1.43
SNX3O60493 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SNX3O60493 AL157884.1-201ENST00000424561 454 ntBASIC6.1□□□□□ -1.43
SNX3O60493 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
SNX3O60493 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SNX3O60493 AC016908.1-201ENST00000442571 1219 ntBASIC6.1□□□□□ -1.43
SNX3O60493 RAB28P2-201ENST00000454299 641 ntBASIC6.1□□□□□ -1.43
SNX3O60493 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
SNX3O60493 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.1□□□□□ -1.43
SNX3O60493 RPL5P16-201ENST00000471467 790 ntBASIC6.1□□□□□ -1.43
SNX3O60493 AL928654.1-201ENST00000476081 354 ntBASIC6.1□□□□□ -1.43
SNX3O60493 HMGB3P14-201ENST00000494195 599 ntBASIC6.1□□□□□ -1.43
SNX3O60493 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
SNX3O60493 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.1□□□□□ -1.43
SNX3O60493 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.1□□□□□ -1.43
SNX3O60493 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.1□□□□□ -1.43
SNX3O60493 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SNX3O60493 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC6.1□□□□□ -1.43
SNX3O60493 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SNX3O60493 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
SNX3O60493 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC6.1□□□□□ -1.43
SNX3O60493 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC6.1□□□□□ -1.43
SNX3O60493 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.1□□□□□ -1.43
SNX3O60493 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.1□□□□□ -1.43
SNX3O60493 AL589863.1-201ENST00000595383 631 ntBASIC6.1□□□□□ -1.43
SNX3O60493 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
SNX3O60493 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.1□□□□□ -1.43
SNX3O60493 AC013489.3-201ENST00000623274 517 ntBASIC6.1□□□□□ -1.43
SNX3O60493 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC6.1□□□□□ -1.43
SNX3O60493 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC6.1□□□□□ -1.43
SNX3O60493 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SNX3O60493 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SNX3O60493 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SNX3O60493 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.1□□□□□ -1.43
SNX3O60493 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SNX3O60493 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SNX3O60493 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.1□□□□□ -1.43
SNX3O60493 AC024651.2-201ENST00000562480 2098 ntBASIC6.1□□□□□ -1.43
SNX3O60493 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SNX3O60493 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SNX3O60493 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SNX3O60493 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.09□□□□□ -1.43
SNX3O60493 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
SNX3O60493 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.09□□□□□ -1.43
SNX3O60493 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SNX3O60493 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SNX3O60493 SNORD16-201ENST00000362803 99 ntBASIC6.09□□□□□ -1.43
SNX3O60493 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.09□□□□□ -1.43
SNX3O60493 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC6.09□□□□□ -1.43
SNX3O60493 PDCL3P5-201ENST00000398028 722 ntBASIC6.09□□□□□ -1.43
SNX3O60493 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC6.09□□□□□ -1.43
SNX3O60493 AC023141.1-201ENST00000419418 379 ntBASIC6.09□□□□□ -1.43
SNX3O60493 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.09□□□□□ -1.43
SNX3O60493 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC6.09□□□□□ -1.43
SNX3O60493 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC6.09□□□□□ -1.43
SNX3O60493 AC092066.1-201ENST00000425131 317 ntBASIC6.09□□□□□ -1.43
SNX3O60493 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.09□□□□□ -1.43
SNX3O60493 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.09□□□□□ -1.43
SNX3O60493 RPS27AP6-201ENST00000427962 448 ntBASIC6.09□□□□□ -1.43
SNX3O60493 AC114402.2-201ENST00000432760 643 ntBASIC6.09□□□□□ -1.43
SNX3O60493 RPL22P11-201ENST00000434894 385 ntBASIC6.09□□□□□ -1.43
SNX3O60493 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SNX3O60493 UBBP5-201ENST00000446970 266 ntBASIC6.09□□□□□ -1.43
SNX3O60493 RN7SL552P-201ENST00000462094 276 ntBASIC6.09□□□□□ -1.43
SNX3O60493 AC126615.1-201ENST00000470084 630 ntBASIC6.09□□□□□ -1.43
SNX3O60493 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.09□□□□□ -1.43
SNX3O60493 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SNX3O60493 AC010343.2-201ENST00000510162 224 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms