Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RpgrQ9R0X5 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RpgrQ9R0X5 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RpgrQ9R0X5 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RpgrQ9R0X5 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RpgrQ9R0X5 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RpgrQ9R0X5 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.32■□□□□ 0.36
RpgrQ9R0X5 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RpgrQ9R0X5 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RpgrQ9R0X5 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RpgrQ9R0X5 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RpgrQ9R0X5 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.32■□□□□ 0.36
RpgrQ9R0X5 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.32■□□□□ 0.36
RpgrQ9R0X5 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.32■□□□□ 0.36
RpgrQ9R0X5 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RpgrQ9R0X5 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RpgrQ9R0X5 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RpgrQ9R0X5 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RpgrQ9R0X5 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RpgrQ9R0X5 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RpgrQ9R0X5 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RpgrQ9R0X5 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RpgrQ9R0X5 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RpgrQ9R0X5 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RpgrQ9R0X5 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RpgrQ9R0X5 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RpgrQ9R0X5 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RpgrQ9R0X5 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RpgrQ9R0X5 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RpgrQ9R0X5 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RpgrQ9R0X5 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RpgrQ9R0X5 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RpgrQ9R0X5 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RpgrQ9R0X5 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RpgrQ9R0X5 Mir2861-201ENSMUST00000175539 82 ntBASIC17.31■□□□□ 0.36
RpgrQ9R0X5 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RpgrQ9R0X5 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RpgrQ9R0X5 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RpgrQ9R0X5 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RpgrQ9R0X5 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RpgrQ9R0X5 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RpgrQ9R0X5 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RpgrQ9R0X5 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RpgrQ9R0X5 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.31■□□□□ 0.36
RpgrQ9R0X5 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RpgrQ9R0X5 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RpgrQ9R0X5 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RpgrQ9R0X5 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RpgrQ9R0X5 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RpgrQ9R0X5 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RpgrQ9R0X5 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RpgrQ9R0X5 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RpgrQ9R0X5 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RpgrQ9R0X5 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.3■□□□□ 0.36
RpgrQ9R0X5 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RpgrQ9R0X5 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RpgrQ9R0X5 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RpgrQ9R0X5 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RpgrQ9R0X5 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.3■□□□□ 0.36
RpgrQ9R0X5 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RpgrQ9R0X5 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RpgrQ9R0X5 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RpgrQ9R0X5 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.3■□□□□ 0.36
RpgrQ9R0X5 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RpgrQ9R0X5 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RpgrQ9R0X5 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RpgrQ9R0X5 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.29■□□□□ 0.36
RpgrQ9R0X5 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RpgrQ9R0X5 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RpgrQ9R0X5 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RpgrQ9R0X5 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RpgrQ9R0X5 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RpgrQ9R0X5 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.29■□□□□ 0.36
RpgrQ9R0X5 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
RpgrQ9R0X5 Gm22240-201ENSMUST00000175225 82 ntBASIC17.29■□□□□ 0.36
RpgrQ9R0X5 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.29■□□□□ 0.36
RpgrQ9R0X5 Gm29791-202ENSMUST00000207888 369 ntBASIC17.29■□□□□ 0.36
RpgrQ9R0X5 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RpgrQ9R0X5 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RpgrQ9R0X5 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RpgrQ9R0X5 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RpgrQ9R0X5 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RpgrQ9R0X5 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RpgrQ9R0X5 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RpgrQ9R0X5 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RpgrQ9R0X5 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RpgrQ9R0X5 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RpgrQ9R0X5 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RpgrQ9R0X5 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RpgrQ9R0X5 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RpgrQ9R0X5 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RpgrQ9R0X5 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RpgrQ9R0X5 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.28■□□□□ 0.36
RpgrQ9R0X5 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RpgrQ9R0X5 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RpgrQ9R0X5 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RpgrQ9R0X5 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.28■□□□□ 0.36
RpgrQ9R0X5 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RpgrQ9R0X5 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RpgrQ9R0X5 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms