Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1bQ9D0N7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1bQ9D0N7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1bQ9D0N7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1bQ9D0N7 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1bQ9D0N7 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1bQ9D0N7 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1bQ9D0N7 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Chaf1bQ9D0N7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Chaf1bQ9D0N7 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.08■□□□□ 0.17
Chaf1bQ9D0N7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
Chaf1bQ9D0N7 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chaf1bQ9D0N7 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chaf1bQ9D0N7 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.08■□□□□ 0.17
Chaf1bQ9D0N7 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.08■□□□□ 0.17
Chaf1bQ9D0N7 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chaf1bQ9D0N7 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Chaf1bQ9D0N7 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chaf1bQ9D0N7 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chaf1bQ9D0N7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chaf1bQ9D0N7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chaf1bQ9D0N7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.08■□□□□ 0.16
Chaf1bQ9D0N7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chaf1bQ9D0N7 Gm38285-201ENSMUST00000192928 922 ntBASIC16.08■□□□□ 0.16
Chaf1bQ9D0N7 Gm18671-201ENSMUST00000214826 683 ntBASIC16.08■□□□□ 0.16
Chaf1bQ9D0N7 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.08■□□□□ 0.16
Chaf1bQ9D0N7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chaf1bQ9D0N7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chaf1bQ9D0N7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Chaf1bQ9D0N7 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chaf1bQ9D0N7 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Chaf1bQ9D0N7 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chaf1bQ9D0N7 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chaf1bQ9D0N7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1bQ9D0N7 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1bQ9D0N7 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1bQ9D0N7 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1bQ9D0N7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1bQ9D0N7 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Chaf1bQ9D0N7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.07■□□□□ 0.16
Chaf1bQ9D0N7 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Chaf1bQ9D0N7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Chaf1bQ9D0N7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1bQ9D0N7 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.07■□□□□ 0.16
Chaf1bQ9D0N7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1bQ9D0N7 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
Chaf1bQ9D0N7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1bQ9D0N7 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1bQ9D0N7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1bQ9D0N7 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1bQ9D0N7 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1bQ9D0N7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1bQ9D0N7 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1bQ9D0N7 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1bQ9D0N7 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1bQ9D0N7 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1bQ9D0N7 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Chaf1bQ9D0N7 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1bQ9D0N7 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Chaf1bQ9D0N7 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chaf1bQ9D0N7 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chaf1bQ9D0N7 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Chaf1bQ9D0N7 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chaf1bQ9D0N7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chaf1bQ9D0N7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.06■□□□□ 0.16
Chaf1bQ9D0N7 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chaf1bQ9D0N7 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Chaf1bQ9D0N7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.06■□□□□ 0.16
Chaf1bQ9D0N7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chaf1bQ9D0N7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chaf1bQ9D0N7 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chaf1bQ9D0N7 Gm7291-201ENSMUST00000199147 382 ntBASIC16.06■□□□□ 0.16
Chaf1bQ9D0N7 Gm10033-202ENSMUST00000211874 928 ntBASIC16.06■□□□□ 0.16
Chaf1bQ9D0N7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.06■□□□□ 0.16
Chaf1bQ9D0N7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chaf1bQ9D0N7 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chaf1bQ9D0N7 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chaf1bQ9D0N7 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chaf1bQ9D0N7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1bQ9D0N7 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1bQ9D0N7 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Chaf1bQ9D0N7 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.05■□□□□ 0.16
Chaf1bQ9D0N7 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.05■□□□□ 0.16
Chaf1bQ9D0N7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1bQ9D0N7 Gm2399-201ENSMUST00000104944 225 ntBASIC16.05■□□□□ 0.16
Chaf1bQ9D0N7 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.05■□□□□ 0.16
Chaf1bQ9D0N7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Chaf1bQ9D0N7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1bQ9D0N7 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.05■□□□□ 0.16
Chaf1bQ9D0N7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.05■□□□□ 0.16
Chaf1bQ9D0N7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1bQ9D0N7 Gm6365-201ENSMUST00000054711 744 ntBASIC16.05■□□□□ 0.16
Chaf1bQ9D0N7 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1bQ9D0N7 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1bQ9D0N7 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1bQ9D0N7 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1bQ9D0N7 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1bQ9D0N7 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.05■□□□□ 0.16
Chaf1bQ9D0N7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chaf1bQ9D0N7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms