Protein–RNA interactions for Protein: Q8K5B8

Hoxc12, Homeobox protein Hox-C12, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc12Q8K5B8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc12Q8K5B8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc12Q8K5B8 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.3□□□□□ -0.12
Hoxc12Q8K5B8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc12Q8K5B8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc12Q8K5B8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc12Q8K5B8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc12Q8K5B8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc12Q8K5B8 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc12Q8K5B8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc12Q8K5B8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc12Q8K5B8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc12Q8K5B8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc12Q8K5B8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Hoxc12Q8K5B8 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Hoxc12Q8K5B8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc12Q8K5B8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc12Q8K5B8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.29□□□□□ -0.12
Hoxc12Q8K5B8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Hoxc12Q8K5B8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc12Q8K5B8 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc12Q8K5B8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc12Q8K5B8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc12Q8K5B8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Hoxc12Q8K5B8 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Hoxc12Q8K5B8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc12Q8K5B8 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc12Q8K5B8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc12Q8K5B8 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc12Q8K5B8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc12Q8K5B8 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc12Q8K5B8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc12Q8K5B8 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc12Q8K5B8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc12Q8K5B8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc12Q8K5B8 Mir5130-201ENSMUST00000175160 84 ntBASIC14.28□□□□□ -0.12
Hoxc12Q8K5B8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Hoxc12Q8K5B8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc12Q8K5B8 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.28□□□□□ -0.12
Hoxc12Q8K5B8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc12Q8K5B8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc12Q8K5B8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc12Q8K5B8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc12Q8K5B8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc12Q8K5B8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc12Q8K5B8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Hoxc12Q8K5B8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc12Q8K5B8 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc12Q8K5B8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc12Q8K5B8 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc12Q8K5B8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Hoxc12Q8K5B8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc12Q8K5B8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc12Q8K5B8 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc12Q8K5B8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc12Q8K5B8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc12Q8K5B8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc12Q8K5B8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.27□□□□□ -0.12
Hoxc12Q8K5B8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc12Q8K5B8 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc12Q8K5B8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc12Q8K5B8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc12Q8K5B8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc12Q8K5B8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Hoxc12Q8K5B8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.27□□□□□ -0.13
Hoxc12Q8K5B8 Gm7791-201ENSMUST00000219066 539 ntBASIC14.27□□□□□ -0.13
Hoxc12Q8K5B8 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc12Q8K5B8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc12Q8K5B8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Hoxc12Q8K5B8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc12Q8K5B8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.27□□□□□ -0.13
Hoxc12Q8K5B8 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.27□□□□□ -0.13
Hoxc12Q8K5B8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc12Q8K5B8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc12Q8K5B8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc12Q8K5B8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc12Q8K5B8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc12Q8K5B8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc12Q8K5B8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Hoxc12Q8K5B8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc12Q8K5B8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc12Q8K5B8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hoxc12Q8K5B8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc12Q8K5B8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.26□□□□□ -0.13
Hoxc12Q8K5B8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc12Q8K5B8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc12Q8K5B8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.26□□□□□ -0.13
Hoxc12Q8K5B8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc12Q8K5B8 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.26□□□□□ -0.13
Hoxc12Q8K5B8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc12Q8K5B8 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc12Q8K5B8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.26□□□□□ -0.13
Hoxc12Q8K5B8 Gm6659-201ENSMUST00000174752 547 ntBASIC14.26□□□□□ -0.13
Hoxc12Q8K5B8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.26□□□□□ -0.13
Hoxc12Q8K5B8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.26□□□□□ -0.13
Hoxc12Q8K5B8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Hoxc12Q8K5B8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc12Q8K5B8 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.26□□□□□ -0.13
Hoxc12Q8K5B8 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Hoxc12Q8K5B8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms