Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col10a1Q05306 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col10a1Q05306 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col10a1Q05306 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col10a1Q05306 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col10a1Q05306 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Col10a1Q05306 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col10a1Q05306 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col10a1Q05306 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col10a1Q05306 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col10a1Q05306 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.72■□□□□ 0.11
Col10a1Q05306 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col10a1Q05306 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col10a1Q05306 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col10a1Q05306 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col10a1Q05306 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col10a1Q05306 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col10a1Q05306 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col10a1Q05306 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.72■□□□□ 0.11
Col10a1Q05306 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.72■□□□□ 0.11
Col10a1Q05306 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.72■□□□□ 0.11
Col10a1Q05306 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col10a1Q05306 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col10a1Q05306 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col10a1Q05306 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col10a1Q05306 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col10a1Q05306 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col10a1Q05306 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col10a1Q05306 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col10a1Q05306 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Col10a1Q05306 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col10a1Q05306 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col10a1Q05306 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Col10a1Q05306 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col10a1Q05306 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Col10a1Q05306 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col10a1Q05306 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col10a1Q05306 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col10a1Q05306 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.71■□□□□ 0.11
Col10a1Q05306 Gm11539-201ENSMUST00000119837 557 ntBASIC15.71■□□□□ 0.11
Col10a1Q05306 Gm13436-201ENSMUST00000120418 567 ntBASIC15.71■□□□□ 0.11
Col10a1Q05306 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.71■□□□□ 0.11
Col10a1Q05306 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col10a1Q05306 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col10a1Q05306 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.71■□□□□ 0.11
Col10a1Q05306 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Col10a1Q05306 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Col10a1Q05306 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col10a1Q05306 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col10a1Q05306 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col10a1Q05306 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col10a1Q05306 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Col10a1Q05306 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col10a1Q05306 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Col10a1Q05306 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col10a1Q05306 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col10a1Q05306 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col10a1Q05306 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col10a1Q05306 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col10a1Q05306 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.7■□□□□ 0.1
Col10a1Q05306 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col10a1Q05306 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col10a1Q05306 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col10a1Q05306 Il3ra-202ENSMUST00000223589 738 ntBASIC15.7■□□□□ 0.1
Col10a1Q05306 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col10a1Q05306 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col10a1Q05306 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col10a1Q05306 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col10a1Q05306 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col10a1Q05306 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col10a1Q05306 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col10a1Q05306 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col10a1Q05306 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col10a1Q05306 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col10a1Q05306 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.7■□□□□ 0.1
Col10a1Q05306 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col10a1Q05306 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col10a1Q05306 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col10a1Q05306 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Col10a1Q05306 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col10a1Q05306 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col10a1Q05306 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col10a1Q05306 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.69■□□□□ 0.1
Col10a1Q05306 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col10a1Q05306 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col10a1Q05306 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.69■□□□□ 0.1
Col10a1Q05306 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.69■□□□□ 0.1
Col10a1Q05306 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.69■□□□□ 0.1
Col10a1Q05306 Gm43799-201ENSMUST00000201845 579 ntBASIC15.69■□□□□ 0.1
Col10a1Q05306 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col10a1Q05306 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col10a1Q05306 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col10a1Q05306 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col10a1Q05306 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.69■□□□□ 0.1
Col10a1Q05306 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col10a1Q05306 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col10a1Q05306 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col10a1Q05306 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col10a1Q05306 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col10a1Q05306 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms