Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.1■□□□□ 0.65
EPHA4P54764 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
EPHA4P54764 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
EPHA4P54764 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.1■□□□□ 0.65
EPHA4P54764 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
EPHA4P54764 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
EPHA4P54764 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
EPHA4P54764 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.09■□□□□ 0.65
EPHA4P54764 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.09■□□□□ 0.65
EPHA4P54764 AL355355.2-201ENST00000442321 338 ntBASIC19.09■□□□□ 0.65
EPHA4P54764 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.09■□□□□ 0.65
EPHA4P54764 YBX1P10-201ENST00000444752 975 ntBASIC19.09■□□□□ 0.65
EPHA4P54764 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.09■□□□□ 0.65
EPHA4P54764 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.09■□□□□ 0.65
EPHA4P54764 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.09■□□□□ 0.65
EPHA4P54764 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
EPHA4P54764 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.09■□□□□ 0.65
EPHA4P54764 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.09■□□□□ 0.65
EPHA4P54764 REXO1L12P-201ENST00000622156 912 ntBASIC19.09■□□□□ 0.65
EPHA4P54764 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
EPHA4P54764 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.09■□□□□ 0.65
EPHA4P54764 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.09■□□□□ 0.65
EPHA4P54764 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
EPHA4P54764 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
EPHA4P54764 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
EPHA4P54764 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
EPHA4P54764 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.09■□□□□ 0.65
EPHA4P54764 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
EPHA4P54764 AC018553.1-201ENST00000616682 1458 ntBASIC19.09■□□□□ 0.65
EPHA4P54764 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.09■□□□□ 0.65
EPHA4P54764 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
EPHA4P54764 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
EPHA4P54764 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
EPHA4P54764 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.08■□□□□ 0.65
EPHA4P54764 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
EPHA4P54764 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
EPHA4P54764 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
EPHA4P54764 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
EPHA4P54764 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
EPHA4P54764 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
EPHA4P54764 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.08■□□□□ 0.64
EPHA4P54764 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
EPHA4P54764 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.08■□□□□ 0.64
EPHA4P54764 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.08■□□□□ 0.64
EPHA4P54764 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
EPHA4P54764 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
EPHA4P54764 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.08■□□□□ 0.64
EPHA4P54764 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
EPHA4P54764 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.08■□□□□ 0.64
EPHA4P54764 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
EPHA4P54764 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
EPHA4P54764 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
EPHA4P54764 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
EPHA4P54764 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.08■□□□□ 0.64
EPHA4P54764 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
EPHA4P54764 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
EPHA4P54764 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.07■□□□□ 0.64
EPHA4P54764 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
EPHA4P54764 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
EPHA4P54764 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.07■□□□□ 0.64
EPHA4P54764 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
EPHA4P54764 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
EPHA4P54764 AC073130.3-201ENST00000624389 2278 ntBASIC19.07■□□□□ 0.64
EPHA4P54764 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
EPHA4P54764 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.07■□□□□ 0.64
EPHA4P54764 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
EPHA4P54764 NIFKP9-201ENST00000419265 221 ntBASIC19.07■□□□□ 0.64
EPHA4P54764 FAM197Y1-201ENST00000421178 764 ntBASIC19.07■□□□□ 0.64
EPHA4P54764 KSR1P1-201ENST00000446298 240 ntBASIC19.07■□□□□ 0.64
EPHA4P54764 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.07■□□□□ 0.64
EPHA4P54764 AP003071.4-201ENST00000562276 1284 ntBASIC19.07■□□□□ 0.64
EPHA4P54764 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.07■□□□□ 0.64
EPHA4P54764 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
EPHA4P54764 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.07■□□□□ 0.64
EPHA4P54764 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
EPHA4P54764 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
EPHA4P54764 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
EPHA4P54764 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
EPHA4P54764 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
EPHA4P54764 AC092667.1-201ENST00000434301 2586 ntBASIC19.06■□□□□ 0.64
EPHA4P54764 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
EPHA4P54764 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
EPHA4P54764 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.06■□□□□ 0.64
EPHA4P54764 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
EPHA4P54764 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EPHA4P54764 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.06■□□□□ 0.64
EPHA4P54764 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.06■□□□□ 0.64
EPHA4P54764 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.06■□□□□ 0.64
EPHA4P54764 AL355075.4-201ENST00000554988 638 ntBASIC19.06■□□□□ 0.64
EPHA4P54764 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.06■□□□□ 0.64
EPHA4P54764 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.06■□□□□ 0.64
EPHA4P54764 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.06■□□□□ 0.64
EPHA4P54764 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.06■□□□□ 0.64
EPHA4P54764 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EPHA4P54764 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.06■□□□□ 0.64
EPHA4P54764 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EPHA4P54764 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
EPHA4P54764 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.06■□□□□ 0.64
EPHA4P54764 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.06■□□□□ 0.64
EPHA4P54764 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms