Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cldn1O88551 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cldn1O88551 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cldn1O88551 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cldn1O88551 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cldn1O88551 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.61□□□□□ -0.07
Cldn1O88551 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cldn1O88551 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.61□□□□□ -0.07
Cldn1O88551 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cldn1O88551 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.61□□□□□ -0.07
Cldn1O88551 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Cldn1O88551 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cldn1O88551 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Cldn1O88551 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cldn1O88551 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cldn1O88551 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cldn1O88551 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cldn1O88551 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cldn1O88551 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Cldn1O88551 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldn1O88551 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.6□□□□□ -0.07
Cldn1O88551 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldn1O88551 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldn1O88551 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldn1O88551 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldn1O88551 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.6□□□□□ -0.07
Cldn1O88551 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.6□□□□□ -0.07
Cldn1O88551 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldn1O88551 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldn1O88551 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.6□□□□□ -0.07
Cldn1O88551 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.6□□□□□ -0.07
Cldn1O88551 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldn1O88551 Gm27742-201ENSMUST00000184667 60 ntBASIC14.6□□□□□ -0.07
Cldn1O88551 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.6□□□□□ -0.07
Cldn1O88551 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldn1O88551 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cldn1O88551 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldn1O88551 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cldn1O88551 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cldn1O88551 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldn1O88551 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.6□□□□□ -0.07
Cldn1O88551 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cldn1O88551 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldn1O88551 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldn1O88551 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cldn1O88551 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldn1O88551 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldn1O88551 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldn1O88551 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cldn1O88551 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cldn1O88551 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cldn1O88551 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cldn1O88551 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cldn1O88551 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cldn1O88551 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cldn1O88551 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cldn1O88551 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cldn1O88551 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cldn1O88551 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cldn1O88551 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cldn1O88551 Gm34391-201ENSMUST00000203706 907 ntBASIC14.59□□□□□ -0.07
Cldn1O88551 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.59□□□□□ -0.07
Cldn1O88551 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cldn1O88551 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cldn1O88551 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Cldn1O88551 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.59□□□□□ -0.07
Cldn1O88551 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cldn1O88551 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cldn1O88551 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cldn1O88551 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cldn1O88551 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cldn1O88551 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cldn1O88551 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Cldn1O88551 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cldn1O88551 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
Cldn1O88551 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cldn1O88551 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cldn1O88551 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cldn1O88551 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cldn1O88551 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cldn1O88551 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cldn1O88551 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cldn1O88551 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.58□□□□□ -0.08
Cldn1O88551 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
Cldn1O88551 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cldn1O88551 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cldn1O88551 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.58□□□□□ -0.08
Cldn1O88551 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cldn1O88551 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.58□□□□□ -0.08
Cldn1O88551 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cldn1O88551 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cldn1O88551 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.58□□□□□ -0.08
Cldn1O88551 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cldn1O88551 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cldn1O88551 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cldn1O88551 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cldn1O88551 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cldn1O88551 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cldn1O88551 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cldn1O88551 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms