Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smim17A0A504 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smim17A0A504 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smim17A0A504 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smim17A0A504 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smim17A0A504 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smim17A0A504 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smim17A0A504 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smim17A0A504 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smim17A0A504 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smim17A0A504 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Smim17A0A504 Gm27801-201ENSMUST00000184174 223 ntBASIC15.53■□□□□ 0.08
Smim17A0A504 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC15.53■□□□□ 0.08
Smim17A0A504 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smim17A0A504 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smim17A0A504 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Smim17A0A504 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smim17A0A504 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smim17A0A504 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smim17A0A504 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smim17A0A504 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Smim17A0A504 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Smim17A0A504 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smim17A0A504 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.53■□□□□ 0.08
Smim17A0A504 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smim17A0A504 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smim17A0A504 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Smim17A0A504 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smim17A0A504 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smim17A0A504 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Smim17A0A504 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smim17A0A504 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smim17A0A504 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smim17A0A504 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Smim17A0A504 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smim17A0A504 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smim17A0A504 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smim17A0A504 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smim17A0A504 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.52■□□□□ 0.08
Smim17A0A504 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smim17A0A504 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smim17A0A504 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smim17A0A504 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Smim17A0A504 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.52■□□□□ 0.08
Smim17A0A504 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.52■□□□□ 0.08
Smim17A0A504 Spcs1-204ENSMUST00000226782 949 ntBASIC15.52■□□□□ 0.08
Smim17A0A504 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smim17A0A504 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smim17A0A504 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.52■□□□□ 0.07
Smim17A0A504 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smim17A0A504 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Smim17A0A504 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.52■□□□□ 0.07
Smim17A0A504 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smim17A0A504 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smim17A0A504 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Smim17A0A504 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Smim17A0A504 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smim17A0A504 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smim17A0A504 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smim17A0A504 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smim17A0A504 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smim17A0A504 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smim17A0A504 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smim17A0A504 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smim17A0A504 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smim17A0A504 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smim17A0A504 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.51■□□□□ 0.07
Smim17A0A504 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smim17A0A504 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smim17A0A504 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Smim17A0A504 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smim17A0A504 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smim17A0A504 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smim17A0A504 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smim17A0A504 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smim17A0A504 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.51■□□□□ 0.07
Smim17A0A504 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.51■□□□□ 0.07
Smim17A0A504 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Smim17A0A504 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smim17A0A504 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Smim17A0A504 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smim17A0A504 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smim17A0A504 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smim17A0A504 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smim17A0A504 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smim17A0A504 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smim17A0A504 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Smim17A0A504 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smim17A0A504 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smim17A0A504 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smim17A0A504 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Smim17A0A504 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smim17A0A504 Gm9847-201ENSMUST00000052528 599 ntBASIC15.5■□□□□ 0.07
Smim17A0A504 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Smim17A0A504 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smim17A0A504 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smim17A0A504 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Smim17A0A504 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Smim17A0A504 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Smim17A0A504 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms