Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-4A0A0G2JFX3 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-4A0A0G2JFX3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Gm45774-201ENSMUST00000211992 2665 ntBASIC11.78□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC11.78□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC11.78□□□□□ -0.52
Trav13d-4A0A0G2JFX3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC11.78□□□□□ -0.52
Trav13d-4A0A0G2JFX3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-4A0A0G2JFX3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC11.78□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-4A0A0G2JFX3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Gm42555-201ENSMUST00000199304 1039 ntBASIC11.77□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Zfp783-201ENSMUST00000095946 670 ntBASIC11.77□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-4A0A0G2JFX3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Hivep3-201ENSMUST00000084306 2973 ntBASIC11.77□□□□□ -0.53
Trav13d-4A0A0G2JFX3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Gm10418-201ENSMUST00000100943 576 ntBASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Gm7290-201ENSMUST00000104990 617 ntBASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Gm12918-201ENSMUST00000120234 636 ntBASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Gm15710-201ENSMUST00000121821 636 ntBASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Gm26571-201ENSMUST00000181399 666 ntBASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Gm5075-201ENSMUST00000196916 622 ntBASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Gm42569-201ENSMUST00000200539 472 ntBASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Gm44549-201ENSMUST00000208351 577 ntBASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms