Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 CABYRP1-201ENST00000465493 1045 ntBASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 RPS3AP49-201ENST00000472161 790 ntBASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 AC117395.1-201ENST00000487390 403 ntBASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 AC108729.1-201ENST00000487812 947 ntBASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 RPEP1-201ENST00000504507 658 ntBASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 AC110760.3-202ENST00000515177 371 ntBASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 RNA5SP318-201ENST00000516352 92 ntBASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 RN7SKP70-201ENST00000516655 271 ntBASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 IGKV2-4-201ENST00000523070 340 ntBASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 AC015818.6-201ENST00000584274 634 ntBASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 AL049840.6-201ENST00000604583 345 ntBASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 NDUFB9P1-201ENST00000604683 510 ntBASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 AC005828.7-201ENST00000607331 556 ntBASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 AC005156.1-201ENST00000613371 573 ntBASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 AC018926.1-201ENST00000616335 435 ntBASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 AC097460.3-201ENST00000623099 442 ntBASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 AC083806.2-201ENST00000617795 2685 ntBASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.79□□□□□ -1.32
PCDHB1Q9Y5F3 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 AC092821.3-202ENST00000641304 2767 ntBASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 MIR365B-201ENST00000362317 111 ntBASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 SNORA64.3-201ENST00000365647 134 ntBASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 RNU6-40P-201ENST00000384254 107 ntBASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 AC098592.2-201ENST00000413158 265 ntBASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 RPLP1P10-201ENST00000413972 339 ntBASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 AL139184.1-202ENST00000422303 222 ntBASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 AC000089.1-201ENST00000424559 801 ntBASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 UBE2D3P3-201ENST00000426992 425 ntBASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 MTCO1P45-201ENST00000431457 267 ntBASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 ELOCP3-201ENST00000439303 348 ntBASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 AL513321.1-201ENST00000441175 761 ntBASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 RPL5P10-201ENST00000445207 894 ntBASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 EEF1B2P3-201ENST00000447718 678 ntBASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 RBMY2HP-201ENST00000457961 720 ntBASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 PPP1R2P6-201ENST00000478565 588 ntBASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 AC016687.1-201ENST00000482574 353 ntBASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 RPL23AP73-201ENST00000492507 471 ntBASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 RN7SL187P-201ENST00000495587 303 ntBASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 AP005902.2-201ENST00000518393 307 ntBASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 MIR4732-201ENST00000581873 76 ntBASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 MIR4271-201ENST00000582451 67 ntBASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 HMGB1P51-201ENST00000605166 638 ntBASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 AC090912.3-201ENST00000609775 533 ntBASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 PCA3_2.1-201ENST00000612507 409 ntBASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 AC010333.3-201ENST00000615100 402 ntBASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms