Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC141002.1-201ENST00000607025 279 ntBASIC7.91□□□□□ -1.14
SCN11AQ9UI33 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SCN11AQ9UI33 RNF19BPY-201ENST00000458209 1550 ntBASIC7.91□□□□□ -1.14
SCN11AQ9UI33 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SCN11AQ9UI33 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
SCN11AQ9UI33 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.91□□□□□ -1.14
SCN11AQ9UI33 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
SCN11AQ9UI33 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SCN11AQ9UI33 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.9□□□□□ -1.14
SCN11AQ9UI33 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC7.9□□□□□ -1.14
SCN11AQ9UI33 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SCN11AQ9UI33 RN7SKP77-201ENST00000363261 353 ntBASIC7.9□□□□□ -1.14
SCN11AQ9UI33 AL391361.1-201ENST00000405580 489 ntBASIC7.9□□□□□ -1.14
SCN11AQ9UI33 AC245096.1-201ENST00000413104 546 ntBASIC7.9□□□□□ -1.14
SCN11AQ9UI33 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC7.9□□□□□ -1.14
SCN11AQ9UI33 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC7.9□□□□□ -1.14
SCN11AQ9UI33 AL512637.1-201ENST00000439523 1231 ntBASIC7.9□□□□□ -1.14
SCN11AQ9UI33 RN7SL269P-201ENST00000467795 305 ntBASIC7.9□□□□□ -1.14
SCN11AQ9UI33 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC7.9□□□□□ -1.14
SCN11AQ9UI33 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC7.9□□□□□ -1.14
SCN11AQ9UI33 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC7.9□□□□□ -1.14
SCN11AQ9UI33 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.9□□□□□ -1.14
SCN11AQ9UI33 AL136131.3-201ENST00000607600 188 ntBASIC7.9□□□□□ -1.14
SCN11AQ9UI33 AC022467.1-201ENST00000614738 749 ntBASIC7.9□□□□□ -1.14
SCN11AQ9UI33 AC245014.3-201ENST00000618589 347 ntBASIC7.9□□□□□ -1.14
SCN11AQ9UI33 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.9□□□□□ -1.14
SCN11AQ9UI33 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SCN11AQ9UI33 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SCN11AQ9UI33 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SCN11AQ9UI33 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.9□□□□□ -1.15
SCN11AQ9UI33 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
SCN11AQ9UI33 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
SCN11AQ9UI33 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC7.9□□□□□ -1.15
SCN11AQ9UI33 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
SCN11AQ9UI33 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
SCN11AQ9UI33 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
SCN11AQ9UI33 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 BZW1P1-201ENST00000454901 1240 ntBASIC7.89□□□□□ -1.15
SCN11AQ9UI33 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 AC110056.1-201ENST00000525759 911 ntBASIC7.89□□□□□ -1.15
SCN11AQ9UI33 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 uc_338.26-201ENST00000612659 160 ntBASIC7.89□□□□□ -1.15
SCN11AQ9UI33 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 PARP4P1-201ENST00000435945 2337 ntBASIC7.89□□□□□ -1.15
SCN11AQ9UI33 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 AC027088.4-201ENST00000611559 1947 ntBASIC7.89□□□□□ -1.15
SCN11AQ9UI33 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 AC004014.2-201ENST00000623718 5122 ntBASIC7.89□□□□□ -1.15
SCN11AQ9UI33 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 AL096829.1-201ENST00000413677 457 ntBASIC7.89□□□□□ -1.15
SCN11AQ9UI33 AC093155.2-201ENST00000420734 937 ntBASIC7.89□□□□□ -1.15
SCN11AQ9UI33 AL035660.1-201ENST00000422041 222 ntBASIC7.89□□□□□ -1.15
SCN11AQ9UI33 AC127526.2-201ENST00000426436 775 ntBASIC7.89□□□□□ -1.15
SCN11AQ9UI33 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 AL157777.1-201ENST00000468100 304 ntBASIC7.89□□□□□ -1.15
SCN11AQ9UI33 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 AL021707.7-201ENST00000607991 416 ntBASIC7.89□□□□□ -1.15
SCN11AQ9UI33 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 AC116667.2-201ENST00000641075 823 ntBASIC7.89□□□□□ -1.15
SCN11AQ9UI33 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 DST-206ENST00000370788 17657 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
SCN11AQ9UI33 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SCN11AQ9UI33 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
SCN11AQ9UI33 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.88□□□□□ -1.15
SCN11AQ9UI33 AL133243.4-201ENST00000623116 3109 ntBASIC7.88□□□□□ -1.15
SCN11AQ9UI33 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC7.88□□□□□ -1.15
SCN11AQ9UI33 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SCN11AQ9UI33 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SCN11AQ9UI33 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SCN11AQ9UI33 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
SCN11AQ9UI33 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SCN11AQ9UI33 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC7.88□□□□□ -1.15
SCN11AQ9UI33 AC245060.4-201ENST00000413293 1121 ntBASIC7.88□□□□□ -1.15
SCN11AQ9UI33 AL451136.1-201ENST00000435399 325 ntBASIC7.88□□□□□ -1.15
SCN11AQ9UI33 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SCN11AQ9UI33 AC093166.4-201ENST00000457867 318 ntBASIC7.88□□□□□ -1.15
SCN11AQ9UI33 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC7.88□□□□□ -1.15
SCN11AQ9UI33 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC7.88□□□□□ -1.15
SCN11AQ9UI33 MIR3176-201ENST00000582210 90 ntBASIC7.88□□□□□ -1.15
SCN11AQ9UI33 AL357153.4-201ENST00000620487 1016 ntBASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms