Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 RN7SL393P-201ENST00000463588 296 ntBASIC6.78□□□□□ -1.32
DKK3Q9UBP4 AL117692.1-201ENST00000494283 713 ntBASIC6.78□□□□□ -1.32
DKK3Q9UBP4 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.78□□□□□ -1.32
DKK3Q9UBP4 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.78□□□□□ -1.32
DKK3Q9UBP4 AL390198.2-201ENST00000510553 222 ntBASIC6.78□□□□□ -1.32
DKK3Q9UBP4 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.78□□□□□ -1.32
DKK3Q9UBP4 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.78□□□□□ -1.32
DKK3Q9UBP4 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC6.78□□□□□ -1.32
DKK3Q9UBP4 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
DKK3Q9UBP4 AP000619.2-201ENST00000546014 969 ntBASIC6.78□□□□□ -1.32
DKK3Q9UBP4 AL445383.1-201ENST00000554689 874 ntBASIC6.78□□□□□ -1.32
DKK3Q9UBP4 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.78□□□□□ -1.32
DKK3Q9UBP4 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.78□□□□□ -1.32
DKK3Q9UBP4 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC6.78□□□□□ -1.32
DKK3Q9UBP4 AP003117.1-201ENST00000602771 554 ntBASIC6.78□□□□□ -1.32
DKK3Q9UBP4 AC110792.4-201ENST00000609843 298 ntBASIC6.78□□□□□ -1.32
DKK3Q9UBP4 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.78□□□□□ -1.32
DKK3Q9UBP4 MIR7854-201ENST00000620068 65 ntBASIC6.78□□□□□ -1.32
DKK3Q9UBP4 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.78□□□□□ -1.32
DKK3Q9UBP4 FO681491.1-202ENST00000623392 737 ntBASIC6.78□□□□□ -1.32
DKK3Q9UBP4 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
DKK3Q9UBP4 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
DKK3Q9UBP4 MTND4P21-201ENST00000453886 1357 ntBASIC6.78□□□□□ -1.32
DKK3Q9UBP4 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
DKK3Q9UBP4 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.78□□□□□ -1.32
DKK3Q9UBP4 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.78□□□□□ -1.32
DKK3Q9UBP4 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
DKK3Q9UBP4 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
DKK3Q9UBP4 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.77□□□□□ -1.32
DKK3Q9UBP4 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.77□□□□□ -1.32
DKK3Q9UBP4 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 OR2W4P-201ENST00000406496 926 ntBASIC6.77□□□□□ -1.33
DKK3Q9UBP4 RNA5SP155-201ENST00000411154 129 ntBASIC6.77□□□□□ -1.33
DKK3Q9UBP4 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 AC008753.1-201ENST00000423096 284 ntBASIC6.77□□□□□ -1.33
DKK3Q9UBP4 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 AC016724.1-201ENST00000453215 421 ntBASIC6.77□□□□□ -1.33
DKK3Q9UBP4 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 AC113398.2-201ENST00000507630 558 ntBASIC6.77□□□□□ -1.33
DKK3Q9UBP4 NACAP5-201ENST00000509863 636 ntBASIC6.77□□□□□ -1.33
DKK3Q9UBP4 OR52H2P-201ENST00000514607 902 ntBASIC6.77□□□□□ -1.33
DKK3Q9UBP4 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 OR4R2P-201ENST00000530815 597 ntBASIC6.77□□□□□ -1.33
DKK3Q9UBP4 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 MTND1P8-201ENST00000571424 950 ntBASIC6.77□□□□□ -1.33
DKK3Q9UBP4 AC016839.1-201ENST00000578162 867 ntBASIC6.77□□□□□ -1.33
DKK3Q9UBP4 AC098483.2-201ENST00000603158 454 ntBASIC6.77□□□□□ -1.33
DKK3Q9UBP4 AL713998.2-201ENST00000604538 1198 ntBASIC6.77□□□□□ -1.33
DKK3Q9UBP4 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 AC015802.5-201ENST00000607478 399 ntBASIC6.77□□□□□ -1.33
DKK3Q9UBP4 MKKS-203ENST00000609375 882 ntTSL 2 BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 AC010333.3-201ENST00000615100 402 ntBASIC6.77□□□□□ -1.33
DKK3Q9UBP4 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 AC022306.3-201ENST00000619930 550 ntBASIC6.77□□□□□ -1.33
DKK3Q9UBP4 AC012254.5-201ENST00000623573 478 ntBASIC6.77□□□□□ -1.33
DKK3Q9UBP4 AC120057.5-201ENST00000623840 154 ntBASIC6.77□□□□□ -1.33
DKK3Q9UBP4 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
DKK3Q9UBP4 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 FANCD2P2-201ENST00000437591 1400 ntBASIC6.76□□□□□ -1.33
DKK3Q9UBP4 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 AL139384.2-201ENST00000613809 3590 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms