Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 MIR4732-201ENST00000581873 76 ntBASIC6.59□□□□□ -1.35
PCDH9Q9HC56 RN7SL66P-201ENST00000582099 264 ntBASIC6.59□□□□□ -1.35
PCDH9Q9HC56 AL353729.2-201ENST00000605859 1249 ntBASIC6.59□□□□□ -1.35
PCDH9Q9HC56 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDH9Q9HC56 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.59□□□□□ -1.35
PCDH9Q9HC56 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDH9Q9HC56 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDH9Q9HC56 AC063952.1-203ENST00000634410 658 ntBASIC6.59□□□□□ -1.35
PCDH9Q9HC56 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PCDH9Q9HC56 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.59□□□□□ -1.35
PCDH9Q9HC56 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PCDH9Q9HC56 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PCDH9Q9HC56 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.59□□□□□ -1.36
PCDH9Q9HC56 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
PCDH9Q9HC56 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 AC245036.1-201ENST00000391727 309 ntBASIC6.58□□□□□ -1.36
PCDH9Q9HC56 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 AL157385.1-201ENST00000446973 268 ntBASIC6.58□□□□□ -1.36
PCDH9Q9HC56 RN7SL221P-201ENST00000466190 281 ntBASIC6.58□□□□□ -1.36
PCDH9Q9HC56 RN7SL413P-201ENST00000482700 297 ntBASIC6.58□□□□□ -1.36
PCDH9Q9HC56 AC015524.1-201ENST00000491585 472 ntBASIC6.58□□□□□ -1.36
PCDH9Q9HC56 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 MRPL57P6-201ENST00000506570 309 ntBASIC6.58□□□□□ -1.36
PCDH9Q9HC56 COX6B1P4-201ENST00000519826 484 ntBASIC6.58□□□□□ -1.36
PCDH9Q9HC56 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 AC009120.3-201ENST00000563335 499 ntBASIC6.58□□□□□ -1.36
PCDH9Q9HC56 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 AP005901.4-201ENST00000577336 569 ntBASIC6.58□□□□□ -1.36
PCDH9Q9HC56 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 AC090616.1-201ENST00000583895 447 ntBASIC6.58□□□□□ -1.36
PCDH9Q9HC56 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 AC019257.2-201ENST00000605539 497 ntBASIC6.58□□□□□ -1.36
PCDH9Q9HC56 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.58□□□□□ -1.36
PCDH9Q9HC56 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 SMG1P5-202ENST00000529428 4219 ntBASIC6.58□□□□□ -1.36
PCDH9Q9HC56 SMG1P2-201ENST00000566127 4221 ntBASIC6.58□□□□□ -1.36
PCDH9Q9HC56 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 AC092692.1-201ENST00000623625 2595 ntBASIC6.58□□□□□ -1.36
PCDH9Q9HC56 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 ZNF969P-201ENST00000510345 2341 ntBASIC6.58□□□□□ -1.36
PCDH9Q9HC56 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.58□□□□□ -1.36
PCDH9Q9HC56 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 RNA5SP85-201ENST00000365378 119 ntBASIC6.57□□□□□ -1.36
PCDH9Q9HC56 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 SNORA70.9-201ENST00000384370 135 ntBASIC6.57□□□□□ -1.36
PCDH9Q9HC56 MIR551B-201ENST00000384984 96 ntBASIC6.57□□□□□ -1.36
PCDH9Q9HC56 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 ARL4AP4-201ENST00000434170 518 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms