Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 DPY19L1P1-201ENST00000417811 2594 ntBASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RPAP1Q9BWH6 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.74□□□□□ -1.17
RPAP1Q9BWH6 AL669831.5-218ENST00000591702 1873 ntBASIC7.74□□□□□ -1.17
RPAP1Q9BWH6 RNA5SP350-201ENST00000363298 111 ntBASIC7.74□□□□□ -1.17
RPAP1Q9BWH6 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC7.74□□□□□ -1.17
RPAP1Q9BWH6 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC7.74□□□□□ -1.17
RPAP1Q9BWH6 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RPAP1Q9BWH6 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC7.74□□□□□ -1.17
RPAP1Q9BWH6 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.74□□□□□ -1.17
RPAP1Q9BWH6 CXCR2P1-202ENST00000443392 1074 ntBASIC7.74□□□□□ -1.17
RPAP1Q9BWH6 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.74□□□□□ -1.17
RPAP1Q9BWH6 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC7.74□□□□□ -1.17
RPAP1Q9BWH6 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.74□□□□□ -1.17
RPAP1Q9BWH6 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.74□□□□□ -1.17
RPAP1Q9BWH6 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC7.74□□□□□ -1.17
RPAP1Q9BWH6 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
RPAP1Q9BWH6 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
RPAP1Q9BWH6 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
RPAP1Q9BWH6 CUBNP3-201ENST00000457461 1784 ntBASIC7.74□□□□□ -1.17
RPAP1Q9BWH6 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
RPAP1Q9BWH6 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
RPAP1Q9BWH6 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RPAP1Q9BWH6 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
RPAP1Q9BWH6 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RPAP1Q9BWH6 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RPAP1Q9BWH6 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
RPAP1Q9BWH6 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 AC017035.1-201ENST00000411999 1115 ntBASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 AC097463.1-201ENST00000447288 481 ntBASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 MGAT2P1-201ENST00000449718 797 ntBASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 NPIPB14P-203ENST00000532298 987 ntBASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 AC008055.1-201ENST00000547032 609 ntBASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 AC233702.7-202ENST00000582941 211 ntBASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 AC073046.2-201ENST00000604756 527 ntBASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 RPSAP75-201ENST00000605848 301 ntBASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 AP001437.1-201ENST00000608783 456 ntBASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 AL080312.2-201ENST00000613001 630 ntBASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 UOX-205ENST00000640983 544 ntTSL 4 BASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RPAP1Q9BWH6 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 U3.43-201ENST00000410734 213 ntBASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 AL354707.3-201ENST00000427308 331 ntBASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 AC009237.1-201ENST00000442127 744 ntBASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 RN7SL221P-201ENST00000466190 281 ntBASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 UGT2A3P7-201ENST00000510485 734 ntBASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 AC073916.1-201ENST00000545095 130 ntBASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 AL136097.3-201ENST00000611097 505 ntBASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 AC073488.6-201ENST00000632293 754 ntBASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms