Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 UBBP5-201ENST00000446970 266 ntBASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 RPS16P9-201ENST00000477220 427 ntBASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 IGKV2D-38-201ENST00000518423 240 ntBASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 OR5D2P-201ENST00000524390 911 ntBASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 MIR4800-201ENST00000537353 80 ntBASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 AC019322.1-201ENST00000571869 389 ntBASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 LSM1P2-201ENST00000604911 322 ntBASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 AL022394.1-201ENST00000606979 292 ntBASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 AC125238.2-201ENST00000430003 1440 ntBASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 AC096921.2-201ENST00000561507 1916 ntBASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 AC079753.1-201ENST00000623243 3868 ntBASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 DNM1P47-203ENST00000571780 12667 ntBASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 AL096800.1-201ENST00000405326 893 ntBASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 AL662791.3-201ENST00000413771 776 ntBASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 AL359633.1-201ENST00000421403 310 ntBASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 CLIC4P3-201ENST00000422221 752 ntBASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 SETP9-201ENST00000423837 832 ntBASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 GYG1P2-201ENST00000426437 1006 ntBASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 PUDPP2-201ENST00000431423 643 ntBASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 PDPN-205ENST00000487038 607 ntTSL 2 BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 RPL5P3-201ENST00000493817 889 ntBASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 Z99943.2-201ENST00000507585 266 ntBASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 COX6B1P4-201ENST00000519826 484 ntBASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 CIPC-206ENST00000555611 599 ntTSL 4 BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 EXOSC3P2-201ENST00000594464 497 ntBASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 MIR7854-201ENST00000620068 65 ntBASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 AC069234.4-201ENST00000621276 412 ntBASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 AC092701.1-201ENST00000623627 1551 ntBASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 CCNT2P1-201ENST00000423082 1315 ntBASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 AC114876.1-201ENST00000490962 1366 ntBASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 AC100810.3-201ENST00000633189 2240 ntBASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC28BQ9BUN5 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 AC125336.1-201ENST00000508893 2827 ntBASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 RN7SKP1-201ENST00000365525 307 ntBASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 MIR433-201ENST00000384837 93 ntBASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 SOD1P1-201ENST00000407803 440 ntBASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 AL139184.1-202ENST00000422303 222 ntBASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 HSPE1P27-201ENST00000430808 296 ntBASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 KRT8P51-201ENST00000438938 274 ntBASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms