Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 SDHDP6-201ENST00000414693 480 ntBASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 SCARNA18.1-201ENST00000516330 83 ntBASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 IMMP1LP3-201ENST00000604197 224 ntBASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 AL359694.2-201ENST00000567753 1615 ntBASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 CLDN16-201ENST00000264734 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 AC125238.2-201ENST00000430003 1440 ntBASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 LINC01877-203ENST00000439734 2287 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 RPL37P18-201ENST00000411602 243 ntBASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 AL512593.1-201ENST00000444758 779 ntBASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 Z80107.2-201ENST00000445127 392 ntBASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 RPL35AP28-201ENST00000459730 331 ntBASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 AC108161.1-201ENST00000461060 402 ntBASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 RN7SL326P-201ENST00000477493 296 ntBASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 RNA5SP228-201ENST00000516232 133 ntBASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 EEF1B2P2-201ENST00000519625 676 ntBASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 AC111186.1-201ENST00000604684 130 ntBASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 AP001784.1-201ENST00000624107 428 ntBASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 MARK2P4-201ENST00000503381 2380 ntBASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC168Q8NDH2 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 PAICS-202ENST00000399688 3297 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 AL096816.1-201ENST00000623300 2920 ntBASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 RNA5SP500-201ENST00000364486 119 ntBASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 VN1R110P-201ENST00000438988 971 ntBASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 AL512637.1-201ENST00000439523 1231 ntBASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 AC096922.1-201ENST00000461635 651 ntBASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 AP000648.1-201ENST00000529682 397 ntBASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 AC093283.1-201ENST00000565306 1075 ntBASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 AL031601.1-201ENST00000605702 394 ntBASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC168Q8NDH2 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms