Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SCXQ7RTU7 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCXQ7RTU7 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCXQ7RTU7 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCXQ7RTU7 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 AC027575.3-201ENST00000583058 2747 ntBASIC4.3□□□□□ -1.72
SCXQ7RTU7 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SCXQ7RTU7 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SCXQ7RTU7 AC015799.1-201ENST00000622996 3122 ntBASIC4.3□□□□□ -1.72
SCXQ7RTU7 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SCXQ7RTU7 CAP1P2-201ENST00000417455 1409 ntBASIC4.3□□□□□ -1.72
SCXQ7RTU7 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SCXQ7RTU7 SFTPD-AS1-201ENST00000608229 5001 ntBASIC4.3□□□□□ -1.72
SCXQ7RTU7 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SCXQ7RTU7 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SCXQ7RTU7 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SCXQ7RTU7 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SCXQ7RTU7 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SCXQ7RTU7 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SCXQ7RTU7 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SCXQ7RTU7 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SCXQ7RTU7 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SCXQ7RTU7 RNA5SP85-201ENST00000365378 119 ntBASIC4.3□□□□□ -1.72
SCXQ7RTU7 RNA5SP474-201ENST00000391234 90 ntBASIC4.3□□□□□ -1.72
SCXQ7RTU7 VN1R12P-201ENST00000403778 876 ntBASIC4.3□□□□□ -1.72
SCXQ7RTU7 AL590635.1-201ENST00000406314 586 ntBASIC4.3□□□□□ -1.72
SCXQ7RTU7 ALDH7A1P4-201ENST00000412255 178 ntBASIC4.3□□□□□ -1.72
SCXQ7RTU7 AL359885.1-201ENST00000415786 903 ntBASIC4.3□□□□□ -1.72
SCXQ7RTU7 THEM7P-201ENST00000419556 672 ntBASIC4.3□□□□□ -1.72
SCXQ7RTU7 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 RPL23AP28-201ENST00000448062 470 ntBASIC4.3□□□□□ -1.72
SCXQ7RTU7 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SCXQ7RTU7 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SCXQ7RTU7 MEF2AP1-201ENST00000454867 863 ntBASIC4.3□□□□□ -1.72
SCXQ7RTU7 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 AC083806.1-201ENST00000468934 316 ntBASIC4.3□□□□□ -1.72
SCXQ7RTU7 AC096743.1-201ENST00000485172 319 ntBASIC4.3□□□□□ -1.72
SCXQ7RTU7 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 AC021146.11-201ENST00000503319 491 ntBASIC4.3□□□□□ -1.72
SCXQ7RTU7 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 AC091849.1-201ENST00000509920 121 ntBASIC4.3□□□□□ -1.72
SCXQ7RTU7 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SCXQ7RTU7 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 AC121758.1-202ENST00000556917 658 ntBASIC4.3□□□□□ -1.72
SCXQ7RTU7 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 MT1CP-201ENST00000567054 174 ntBASIC4.3□□□□□ -1.72
SCXQ7RTU7 AC025283.1-201ENST00000572039 734 ntBASIC4.3□□□□□ -1.72
SCXQ7RTU7 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 HNRNPA3P9-201ENST00000604913 979 ntBASIC4.3□□□□□ -1.72
SCXQ7RTU7 AL035410.2-201ENST00000604963 864 ntBASIC4.3□□□□□ -1.72
SCXQ7RTU7 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 MIR7109-201ENST00000613748 65 ntBASIC4.3□□□□□ -1.72
SCXQ7RTU7 uc_338.29-201ENST00000615099 168 ntBASIC4.3□□□□□ -1.72
SCXQ7RTU7 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC4.3□□□□□ -1.72
SCXQ7RTU7 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SCXQ7RTU7 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SCXQ7RTU7 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SCXQ7RTU7 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SCXQ7RTU7 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SCXQ7RTU7 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SCXQ7RTU7 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SCXQ7RTU7 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 AC020978.6-201ENST00000571197 3177 ntBASIC4.3□□□□□ -1.72
SCXQ7RTU7 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC4.3□□□□□ -1.72
SCXQ7RTU7 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SCXQ7RTU7 AC133552.1-201ENST00000569988 4007 ntBASIC4.3□□□□□ -1.72
SCXQ7RTU7 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SCXQ7RTU7 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SCXQ7RTU7 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SCXQ7RTU7 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SCXQ7RTU7 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SCXQ7RTU7 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SCXQ7RTU7 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SCXQ7RTU7 CDY11P-201ENST00000447168 1651 ntBASIC4.29□□□□□ -1.72
SCXQ7RTU7 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC4.29□□□□□ -1.72
SCXQ7RTU7 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms