Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 OR11H13P-201ENST00000359695 979 ntBASIC6.07□□□□□ -1.44
RTL4Q6ZR62 MRPS6P2-201ENST00000381143 370 ntBASIC6.07□□□□□ -1.44
RTL4Q6ZR62 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 AL359092.1-201ENST00000417156 265 ntBASIC6.07□□□□□ -1.44
RTL4Q6ZR62 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 AL451136.1-201ENST00000435399 325 ntBASIC6.07□□□□□ -1.44
RTL4Q6ZR62 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 AC234771.2-201ENST00000445718 597 ntBASIC6.07□□□□□ -1.44
RTL4Q6ZR62 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 CCNJP1-201ENST00000450600 1149 ntBASIC6.07□□□□□ -1.44
RTL4Q6ZR62 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 RPL17P2-201ENST00000491913 451 ntBASIC6.07□□□□□ -1.44
RTL4Q6ZR62 AC083906.1-201ENST00000509298 406 ntBASIC6.07□□□□□ -1.44
RTL4Q6ZR62 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.07□□□□□ -1.44
RTL4Q6ZR62 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 AL162632.2-201ENST00000553933 399 ntBASIC6.07□□□□□ -1.44
RTL4Q6ZR62 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 SYPL1P2-201ENST00000582878 727 ntBASIC6.07□□□□□ -1.44
RTL4Q6ZR62 AC091193.1-201ENST00000604640 448 ntBASIC6.07□□□□□ -1.44
RTL4Q6ZR62 NDUFB9P1-201ENST00000604683 510 ntBASIC6.07□□□□□ -1.44
RTL4Q6ZR62 AL352984.2-202ENST00000613699 155 ntBASIC6.07□□□□□ -1.44
RTL4Q6ZR62 AC005277.2-201ENST00000617898 390 ntBASIC6.07□□□□□ -1.44
RTL4Q6ZR62 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 AC093297.3-201ENST00000607056 2517 ntBASIC6.07□□□□□ -1.44
RTL4Q6ZR62 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 AC074141.1-201ENST00000588129 2995 ntBASIC6.07□□□□□ -1.44
RTL4Q6ZR62 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 AL731556.1-201ENST00000394628 3711 ntBASIC6.07□□□□□ -1.44
RTL4Q6ZR62 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 AC022613.3-201ENST00000560740 1346 ntBASIC6.06□□□□□ -1.44
RTL4Q6ZR62 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 AC098818.1-201ENST00000478593 252 ntBASIC6.06□□□□□ -1.44
RTL4Q6ZR62 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 AC008429.2-201ENST00000523057 864 ntBASIC6.06□□□□□ -1.44
RTL4Q6ZR62 AC124891.1-201ENST00000536322 519 ntBASIC6.06□□□□□ -1.44
RTL4Q6ZR62 TDGP1-201ENST00000543961 1229 ntBASIC6.06□□□□□ -1.44
RTL4Q6ZR62 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 AC026956.1-201ENST00000558741 396 ntBASIC6.06□□□□□ -1.44
RTL4Q6ZR62 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 AC019257.2-201ENST00000605539 497 ntBASIC6.06□□□□□ -1.44
RTL4Q6ZR62 AL589743.6-201ENST00000611025 117 ntBASIC6.06□□□□□ -1.44
RTL4Q6ZR62 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.06□□□□□ -1.44
RTL4Q6ZR62 U1.41-201ENST00000617626 165 ntBASIC6.06□□□□□ -1.44
RTL4Q6ZR62 MIR6823-201ENST00000622118 61 ntBASIC6.06□□□□□ -1.44
RTL4Q6ZR62 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RTL4Q6ZR62 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RTL4Q6ZR62 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.05□□□□□ -1.44
RTL4Q6ZR62 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RTL4Q6ZR62 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
RTL4Q6ZR62 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
RTL4Q6ZR62 AC006213.6-201ENST00000623722 4179 ntBASIC6.05□□□□□ -1.44
RTL4Q6ZR62 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
RTL4Q6ZR62 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
RTL4Q6ZR62 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RTL4Q6ZR62 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 148.4 ms