Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PDS5AQ29RF7 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PDS5AQ29RF7 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC7.57□□□□□ -1.2
PDS5AQ29RF7 ATP6V1E1P1-201ENST00000439215 681 ntBASIC7.57□□□□□ -1.2
PDS5AQ29RF7 DNAJA1P5-201ENST00000440278 943 ntBASIC7.57□□□□□ -1.2
PDS5AQ29RF7 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC7.57□□□□□ -1.2
PDS5AQ29RF7 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.57□□□□□ -1.2
PDS5AQ29RF7 KATNBL1P4-201ENST00000503545 918 ntBASIC7.57□□□□□ -1.2
PDS5AQ29RF7 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.57□□□□□ -1.2
PDS5AQ29RF7 FAU-203ENST00000525297 355 ntTSL 5 BASIC7.57□□□□□ -1.2
PDS5AQ29RF7 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7.57□□□□□ -1.2
PDS5AQ29RF7 RPA2P3-201ENST00000533268 770 ntBASIC7.57□□□□□ -1.2
PDS5AQ29RF7 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.57□□□□□ -1.2
PDS5AQ29RF7 AC090115.2-201ENST00000548060 883 ntBASIC7.57□□□□□ -1.2
PDS5AQ29RF7 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PDS5AQ29RF7 AC007346.1-201ENST00000569208 867 ntBASIC7.57□□□□□ -1.2
PDS5AQ29RF7 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PDS5AQ29RF7 AC004801.6-201ENST00000616571 978 ntBASIC7.57□□□□□ -1.2
PDS5AQ29RF7 AL512652.1-201ENST00000619006 500 ntBASIC7.57□□□□□ -1.2
PDS5AQ29RF7 AL359742.1-201ENST00000622497 540 ntBASIC7.57□□□□□ -1.2
PDS5AQ29RF7 AC022400.9-201ENST00000623633 273 ntBASIC7.57□□□□□ -1.2
PDS5AQ29RF7 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.57□□□□□ -1.2
PDS5AQ29RF7 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.57□□□□□ -1.2
PDS5AQ29RF7 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PDS5AQ29RF7 CDY10P-201ENST00000452415 1567 ntBASIC7.57□□□□□ -1.2
PDS5AQ29RF7 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.57□□□□□ -1.2
PDS5AQ29RF7 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
PDS5AQ29RF7 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
PDS5AQ29RF7 SALL4P7-201ENST00000555779 3120 ntBASIC7.57□□□□□ -1.2
PDS5AQ29RF7 AC002090.1-201ENST00000625000 2138 ntBASIC7.57□□□□□ -1.2
PDS5AQ29RF7 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.57□□□□□ -1.2
PDS5AQ29RF7 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.57□□□□□ -1.2
PDS5AQ29RF7 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PDS5AQ29RF7 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
PDS5AQ29RF7 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PDS5AQ29RF7 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PDS5AQ29RF7 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
PDS5AQ29RF7 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.57□□□□□ -1.2
PDS5AQ29RF7 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PDS5AQ29RF7 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC7.57□□□□□ -1.2
PDS5AQ29RF7 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PDS5AQ29RF7 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PDS5AQ29RF7 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC7.56□□□□□ -1.2
PDS5AQ29RF7 FAM32BP-201ENST00000344033 333 ntBASIC7.56□□□□□ -1.2
PDS5AQ29RF7 PKIB-203ENST00000368446 556 ntTSL 2 BASIC7.56□□□□□ -1.2
PDS5AQ29RF7 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.56□□□□□ -1.2
PDS5AQ29RF7 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.56□□□□□ -1.2
PDS5AQ29RF7 CYP4F30P-202ENST00000420048 405 ntBASIC7.56□□□□□ -1.2
PDS5AQ29RF7 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PDS5AQ29RF7 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC7.56□□□□□ -1.2
PDS5AQ29RF7 AC023141.3-201ENST00000436698 278 ntBASIC7.56□□□□□ -1.2
PDS5AQ29RF7 AC110602.1-201ENST00000437414 318 ntBASIC7.56□□□□□ -1.2
PDS5AQ29RF7 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.56□□□□□ -1.2
PDS5AQ29RF7 LDHAP1-201ENST00000509421 992 ntBASIC7.56□□□□□ -1.2
PDS5AQ29RF7 CR383658.1-201ENST00000514609 734 ntBASIC7.56□□□□□ -1.2
PDS5AQ29RF7 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PDS5AQ29RF7 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.56□□□□□ -1.2
PDS5AQ29RF7 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.56□□□□□ -1.2
PDS5AQ29RF7 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.56□□□□□ -1.2
PDS5AQ29RF7 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.56□□□□□ -1.2
PDS5AQ29RF7 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.56□□□□□ -1.2
PDS5AQ29RF7 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC7.56□□□□□ -1.2
PDS5AQ29RF7 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PDS5AQ29RF7 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PDS5AQ29RF7 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PDS5AQ29RF7 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
PDS5AQ29RF7 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PDS5AQ29RF7 AC011416.1-201ENST00000514947 1732 ntBASIC7.56□□□□□ -1.2
PDS5AQ29RF7 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.56□□□□□ -1.2
PDS5AQ29RF7 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PDS5AQ29RF7 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PDS5AQ29RF7 AC093225.1-201ENST00000506867 1408 ntBASIC7.56□□□□□ -1.2
PDS5AQ29RF7 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PDS5AQ29RF7 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PDS5AQ29RF7 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PDS5AQ29RF7 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.56□□□□□ -1.2
PDS5AQ29RF7 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PDS5AQ29RF7 AL136531.3-201ENST00000624378 3658 ntBASIC7.55□□□□□ -1.2
PDS5AQ29RF7 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC7.55□□□□□ -1.2
PDS5AQ29RF7 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
PDS5AQ29RF7 GUCY1B2-204ENST00000531898 1979 ntBASIC7.55□□□□□ -1.2
PDS5AQ29RF7 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
PDS5AQ29RF7 MIR130B-202ENST00000385018 82 ntBASIC7.55□□□□□ -1.2
PDS5AQ29RF7 AC004386.1-201ENST00000393214 761 ntBASIC7.55□□□□□ -1.2
PDS5AQ29RF7 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.55□□□□□ -1.2
PDS5AQ29RF7 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC7.55□□□□□ -1.2
PDS5AQ29RF7 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.55□□□□□ -1.2
PDS5AQ29RF7 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC7.55□□□□□ -1.2
PDS5AQ29RF7 RANP2-201ENST00000456833 229 ntBASIC7.55□□□□□ -1.2
PDS5AQ29RF7 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.55□□□□□ -1.2
PDS5AQ29RF7 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.55□□□□□ -1.2
PDS5AQ29RF7 IGHV1-14-201ENST00000523391 241 ntBASIC7.55□□□□□ -1.2
PDS5AQ29RF7 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
PDS5AQ29RF7 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.55□□□□□ -1.2
PDS5AQ29RF7 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC7.55□□□□□ -1.2
PDS5AQ29RF7 AC090826.1-203ENST00000569235 490 ntBASIC7.55□□□□□ -1.2
PDS5AQ29RF7 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC7.55□□□□□ -1.2
PDS5AQ29RF7 AL136097.3-201ENST00000611097 505 ntBASIC7.55□□□□□ -1.2
PDS5AQ29RF7 MIR6861-201ENST00000618657 64 ntBASIC7.55□□□□□ -1.2
PDS5AQ29RF7 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms