Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.17□□□□□ -1.42
ABCD3P28288 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ABCD3P28288 AC245100.2-201ENST00000454544 1679 ntBASIC6.17□□□□□ -1.42
ABCD3P28288 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ABCD3P28288 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ABCD3P28288 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ABCD3P28288 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ABCD3P28288 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.17□□□□□ -1.42
ABCD3P28288 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ABCD3P28288 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ABCD3P28288 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ABCD3P28288 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
ABCD3P28288 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.16□□□□□ -1.42
ABCD3P28288 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
ABCD3P28288 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
ABCD3P28288 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ABCD3P28288 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.16□□□□□ -1.42
ABCD3P28288 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.16□□□□□ -1.42
ABCD3P28288 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ABCD3P28288 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ABCD3P28288 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.16□□□□□ -1.42
ABCD3P28288 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.16□□□□□ -1.42
ABCD3P28288 AC010894.1-201ENST00000313760 361 ntBASIC6.16□□□□□ -1.42
ABCD3P28288 ST13P16-201ENST00000401760 781 ntBASIC6.16□□□□□ -1.42
ABCD3P28288 OR1F12-201ENST00000402365 945 ntBASIC6.16□□□□□ -1.42
ABCD3P28288 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.16□□□□□ -1.42
ABCD3P28288 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ABCD3P28288 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.16□□□□□ -1.42
ABCD3P28288 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ABCD3P28288 MRPS33P4-201ENST00000434892 317 ntBASIC6.16□□□□□ -1.42
ABCD3P28288 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.16□□□□□ -1.42
ABCD3P28288 WDR82P2-201ENST00000444540 928 ntBASIC6.16□□□□□ -1.42
ABCD3P28288 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.16□□□□□ -1.42
ABCD3P28288 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.16□□□□□ -1.42
ABCD3P28288 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.16□□□□□ -1.42
ABCD3P28288 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.16□□□□□ -1.42
ABCD3P28288 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.16□□□□□ -1.42
ABCD3P28288 AC139713.1-202ENST00000512366 460 ntBASIC6.16□□□□□ -1.42
ABCD3P28288 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.16□□□□□ -1.42
ABCD3P28288 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.16□□□□□ -1.42
ABCD3P28288 OR10D4P-201ENST00000525892 951 ntBASIC6.16□□□□□ -1.42
ABCD3P28288 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.16□□□□□ -1.42
ABCD3P28288 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.16□□□□□ -1.42
ABCD3P28288 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.16□□□□□ -1.42
ABCD3P28288 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.16□□□□□ -1.42
ABCD3P28288 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.16□□□□□ -1.42
ABCD3P28288 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.16□□□□□ -1.42
ABCD3P28288 AC011921.2-201ENST00000589465 152 ntBASIC6.16□□□□□ -1.42
ABCD3P28288 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.16□□□□□ -1.42
ABCD3P28288 HMGB1P51-201ENST00000605166 638 ntBASIC6.16□□□□□ -1.42
ABCD3P28288 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.16□□□□□ -1.42
ABCD3P28288 AC015922.4-201ENST00000612568 690 ntBASIC6.16□□□□□ -1.42
ABCD3P28288 AC005899.6-201ENST00000620729 297 ntBASIC6.16□□□□□ -1.42
ABCD3P28288 AL354702.2-202ENST00000641481 890 ntBASIC6.16□□□□□ -1.42
ABCD3P28288 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.16□□□□□ -1.42
ABCD3P28288 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
ABCD3P28288 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ABCD3P28288 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ABCD3P28288 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ABCD3P28288 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.16□□□□□ -1.42
ABCD3P28288 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ABCD3P28288 AC112243.1-201ENST00000623949 3851 ntBASIC6.16□□□□□ -1.42
ABCD3P28288 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.16□□□□□ -1.42
ABCD3P28288 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
ABCD3P28288 MKI67P1-201ENST00000604297 1460 ntBASIC6.15□□□□□ -1.42
ABCD3P28288 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
ABCD3P28288 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.15□□□□□ -1.42
ABCD3P28288 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.15□□□□□ -1.42
ABCD3P28288 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
ABCD3P28288 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.15□□□□□ -1.42
ABCD3P28288 AL136531.3-201ENST00000624378 3658 ntBASIC6.15□□□□□ -1.42
ABCD3P28288 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
ABCD3P28288 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
ABCD3P28288 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
ABCD3P28288 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
ABCD3P28288 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
ABCD3P28288 OR56A4-201ENST00000330728 1209 ntBASIC6.15□□□□□ -1.42
ABCD3P28288 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
ABCD3P28288 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
ABCD3P28288 SNORA38B-201ENST00000363524 131 ntBASIC6.15□□□□□ -1.42
ABCD3P28288 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
ABCD3P28288 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
ABCD3P28288 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
ABCD3P28288 VN1R53P-201ENST00000429536 957 ntBASIC6.15□□□□□ -1.42
ABCD3P28288 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
ABCD3P28288 SNRPFP2-201ENST00000440710 251 ntBASIC6.15□□□□□ -1.42
ABCD3P28288 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC6.15□□□□□ -1.42
ABCD3P28288 AC011742.2-201ENST00000443818 352 ntBASIC6.15□□□□□ -1.42
ABCD3P28288 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.15□□□□□ -1.42
ABCD3P28288 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.15□□□□□ -1.42
ABCD3P28288 AKR1D1P1-201ENST00000457236 936 ntBASIC6.15□□□□□ -1.42
ABCD3P28288 AC002075.1-201ENST00000457396 676 ntBASIC6.15□□□□□ -1.42
ABCD3P28288 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
ABCD3P28288 RPS7P11-201ENST00000484240 586 ntBASIC6.15□□□□□ -1.42
ABCD3P28288 AC074386.1-206ENST00000487102 761 ntBASIC6.15□□□□□ -1.42
ABCD3P28288 RN7SL561P-201ENST00000488553 281 ntBASIC6.15□□□□□ -1.42
ABCD3P28288 PCNAP1-201ENST00000505363 709 ntBASIC6.15□□□□□ -1.42
ABCD3P28288 AC108157.1-201ENST00000510511 539 ntBASIC6.15□□□□□ -1.42
ABCD3P28288 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.15□□□□□ -1.42
ABCD3P28288 AC113191.1-201ENST00000517759 403 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms