Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 RNU11-6P-201ENST00000391127 133 ntBASIC4.82□□□□□ -1.64
CXCL1P09341 AL359092.1-201ENST00000417156 265 ntBASIC4.82□□□□□ -1.64
CXCL1P09341 AC134879.1-201ENST00000426062 394 ntBASIC4.82□□□□□ -1.64
CXCL1P09341 AL357632.1-201ENST00000426688 643 ntBASIC4.82□□□□□ -1.64
CXCL1P09341 NPM1P25-201ENST00000429734 854 ntBASIC4.82□□□□□ -1.64
CXCL1P09341 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC4.82□□□□□ -1.64
CXCL1P09341 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC4.82□□□□□ -1.64
CXCL1P09341 RPL12P18-201ENST00000437175 325 ntBASIC4.82□□□□□ -1.64
CXCL1P09341 AC009518.3-201ENST00000438972 253 ntBASIC4.82□□□□□ -1.64
CXCL1P09341 RPL23AP28-201ENST00000448062 470 ntBASIC4.82□□□□□ -1.64
CXCL1P09341 SRP68P2-201ENST00000456184 254 ntBASIC4.82□□□□□ -1.64
CXCL1P09341 RN7SL282P-201ENST00000479676 297 ntBASIC4.82□□□□□ -1.64
CXCL1P09341 RPL7AP23-201ENST00000482625 776 ntBASIC4.82□□□□□ -1.64
CXCL1P09341 RN7SL647P-201ENST00000485429 300 ntBASIC4.82□□□□□ -1.64
CXCL1P09341 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC4.82□□□□□ -1.64
CXCL1P09341 AC138832.1-201ENST00000522871 556 ntBASIC4.82□□□□□ -1.64
CXCL1P09341 SNRPCP6-201ENST00000528310 210 ntBASIC4.82□□□□□ -1.64
CXCL1P09341 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC4.82□□□□□ -1.64
CXCL1P09341 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC4.82□□□□□ -1.64
CXCL1P09341 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC4.82□□□□□ -1.64
CXCL1P09341 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC4.82□□□□□ -1.64
CXCL1P09341 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
CXCL1P09341 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.82□□□□□ -1.64
CXCL1P09341 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC4.82□□□□□ -1.64
CXCL1P09341 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC4.82□□□□□ -1.64
CXCL1P09341 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CXCL1P09341 AC060780.2-201ENST00000589047 198 ntBASIC4.82□□□□□ -1.64
CXCL1P09341 AC114488.2-208ENST00000591592 578 ntTSL 5 BASIC4.82□□□□□ -1.64
CXCL1P09341 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.82□□□□□ -1.64
CXCL1P09341 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC4.82□□□□□ -1.64
CXCL1P09341 PTCHD3P1-201ENST00000612350 537 ntBASIC4.82□□□□□ -1.64
CXCL1P09341 AC106782.7-201ENST00000624024 418 ntBASIC4.82□□□□□ -1.64
CXCL1P09341 AC133555.5-201ENST00000624430 418 ntBASIC4.82□□□□□ -1.64
CXCL1P09341 AC073857.1-201ENST00000625082 1054 ntBASIC4.82□□□□□ -1.64
CXCL1P09341 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC4.82□□□□□ -1.64
CXCL1P09341 AC140479.4-205ENST00000636339 820 ntBASIC4.82□□□□□ -1.64
CXCL1P09341 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CXCL1P09341 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CXCL1P09341 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CXCL1P09341 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CXCL1P09341 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CXCL1P09341 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CXCL1P09341 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC4.82□□□□□ -1.64
CXCL1P09341 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CXCL1P09341 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CXCL1P09341 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
CXCL1P09341 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.81□□□□□ -1.64
CXCL1P09341 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CXCL1P09341 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
CXCL1P09341 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CXCL1P09341 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CXCL1P09341 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CXCL1P09341 CCNT2P1-201ENST00000423082 1315 ntBASIC4.81□□□□□ -1.64
CXCL1P09341 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CXCL1P09341 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CXCL1P09341 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.81□□□□□ -1.64
CXCL1P09341 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CXCL1P09341 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CXCL1P09341 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CXCL1P09341 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CXCL1P09341 PKIB-203ENST00000368446 556 ntTSL 2 BASIC4.81□□□□□ -1.64
CXCL1P09341 AL359475.1-201ENST00000414505 292 ntTSL 3 BASIC4.81□□□□□ -1.64
CXCL1P09341 AC109638.1-201ENST00000417406 326 ntBASIC4.81□□□□□ -1.64
CXCL1P09341 RPL23AP85-201ENST00000421838 433 ntBASIC4.81□□□□□ -1.64
CXCL1P09341 AL354707.3-201ENST00000427308 331 ntBASIC4.81□□□□□ -1.64
CXCL1P09341 AL590128.1-201ENST00000433407 286 ntBASIC4.81□□□□□ -1.64
CXCL1P09341 AL731534.1-201ENST00000434711 269 ntBASIC4.81□□□□□ -1.64
CXCL1P09341 ST13P2-201ENST00000438916 1109 ntBASIC4.81□□□□□ -1.64
CXCL1P09341 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.81□□□□□ -1.64
CXCL1P09341 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC4.81□□□□□ -1.64
CXCL1P09341 AC073072.2-201ENST00000447425 348 ntBASIC4.81□□□□□ -1.64
CXCL1P09341 RPL7P14-201ENST00000449851 741 ntBASIC4.81□□□□□ -1.64
CXCL1P09341 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC4.81□□□□□ -1.64
CXCL1P09341 AC004692.1-201ENST00000455430 424 ntBASIC4.81□□□□□ -1.64
CXCL1P09341 OR7E7P-201ENST00000455678 1012 ntBASIC4.81□□□□□ -1.64
CXCL1P09341 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC4.81□□□□□ -1.64
CXCL1P09341 AC112187.1-201ENST00000455837 479 ntBASIC4.81□□□□□ -1.64
CXCL1P09341 SNORA35.1-201ENST00000458908 128 ntBASIC4.81□□□□□ -1.64
CXCL1P09341 AC091849.1-201ENST00000509920 121 ntBASIC4.81□□□□□ -1.64
CXCL1P09341 CYP4F27P-201ENST00000514557 494 ntBASIC4.81□□□□□ -1.64
CXCL1P09341 TBCA-209ENST00000522370 435 ntTSL 3 BASIC4.81□□□□□ -1.64
CXCL1P09341 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC4.81□□□□□ -1.64
CXCL1P09341 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC4.81□□□□□ -1.64
CXCL1P09341 SSU72P6-201ENST00000532644 488 ntBASIC4.81□□□□□ -1.64
CXCL1P09341 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CXCL1P09341 AC140063.1-201ENST00000541343 259 ntBASIC4.81□□□□□ -1.64
CXCL1P09341 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.81□□□□□ -1.64
CXCL1P09341 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CXCL1P09341 AL445383.1-201ENST00000554689 874 ntBASIC4.81□□□□□ -1.64
CXCL1P09341 HMGN2P47-201ENST00000559378 272 ntBASIC4.81□□□□□ -1.64
CXCL1P09341 BMS1P8-201ENST00000565049 1178 ntBASIC4.81□□□□□ -1.64
CXCL1P09341 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.81□□□□□ -1.64
CXCL1P09341 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CXCL1P09341 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC4.81□□□□□ -1.64
CXCL1P09341 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC4.81□□□□□ -1.64
CXCL1P09341 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
CXCL1P09341 RPL12P48-201ENST00000605620 304 ntBASIC4.81□□□□□ -1.64
CXCL1P09341 pRNA.9-201ENST00000618609 89 ntBASIC4.81□□□□□ -1.64
CXCL1P09341 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CXCL1P09341 OR7A1P-202ENST00000641542 1158 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms