Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC120036.2-201ENST00000509729 1474 ntBASIC6.73□□□□□ -1.33
TRIM38O00635 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM38O00635 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
TRIM38O00635 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM38O00635 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.73□□□□□ -1.33
TRIM38O00635 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM38O00635 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.73□□□□□ -1.33
TRIM38O00635 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.73□□□□□ -1.33
TRIM38O00635 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM38O00635 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM38O00635 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM38O00635 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
TRIM38O00635 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.73□□□□□ -1.33
TRIM38O00635 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM38O00635 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.73□□□□□ -1.33
TRIM38O00635 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
TRIM38O00635 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM38O00635 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM38O00635 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC6.73□□□□□ -1.33
TRIM38O00635 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM38O00635 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
TRIM38O00635 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.73□□□□□ -1.33
TRIM38O00635 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM38O00635 VN1R12P-201ENST00000403778 876 ntBASIC6.73□□□□□ -1.33
TRIM38O00635 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM38O00635 USP9YP19-201ENST00000412165 485 ntBASIC6.73□□□□□ -1.33
TRIM38O00635 AL713922.1-201ENST00000416477 747 ntBASIC6.73□□□□□ -1.33
TRIM38O00635 AL445528.1-201ENST00000426330 420 ntBASIC6.73□□□□□ -1.33
TRIM38O00635 ELOCP6-201ENST00000429066 328 ntBASIC6.73□□□□□ -1.33
TRIM38O00635 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM38O00635 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC6.73□□□□□ -1.33
TRIM38O00635 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC6.73□□□□□ -1.33
TRIM38O00635 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM38O00635 AC234771.2-201ENST00000445718 597 ntBASIC6.73□□□□□ -1.33
TRIM38O00635 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM38O00635 ELOCP12-201ENST00000458706 328 ntBASIC6.73□□□□□ -1.33
TRIM38O00635 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM38O00635 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.73□□□□□ -1.33
TRIM38O00635 RNA5SP278-201ENST00000517055 102 ntBASIC6.73□□□□□ -1.33
TRIM38O00635 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM38O00635 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC6.73□□□□□ -1.33
TRIM38O00635 OR4A41P-201ENST00000533053 928 ntBASIC6.73□□□□□ -1.33
TRIM38O00635 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC6.73□□□□□ -1.33
TRIM38O00635 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.73□□□□□ -1.33
TRIM38O00635 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.73□□□□□ -1.33
TRIM38O00635 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM38O00635 DIMT1P1-201ENST00000603970 763 ntBASIC6.73□□□□□ -1.33
TRIM38O00635 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC6.73□□□□□ -1.33
TRIM38O00635 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.73□□□□□ -1.33
TRIM38O00635 DLEU2L-201ENST00000371086 3555 ntBASIC6.73□□□□□ -1.33
TRIM38O00635 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM38O00635 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM38O00635 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM38O00635 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM38O00635 AL591848.4-201ENST00000567832 3472 ntBASIC6.73□□□□□ -1.33
TRIM38O00635 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
TRIM38O00635 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
TRIM38O00635 ICE2P1-201ENST00000512800 1849 ntBASIC6.73□□□□□ -1.33
TRIM38O00635 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
TRIM38O00635 NEK2P4-201ENST00000425793 1329 ntBASIC6.73□□□□□ -1.33
TRIM38O00635 AL512310.3-201ENST00000547023 1335 ntBASIC6.73□□□□□ -1.33
TRIM38O00635 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM38O00635 CR382285.2-201ENST00000624662 1495 ntBASIC6.73□□□□□ -1.33
TRIM38O00635 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
TRIM38O00635 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.72□□□□□ -1.33
TRIM38O00635 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.72□□□□□ -1.33
TRIM38O00635 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.72□□□□□ -1.33
TRIM38O00635 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC6.72□□□□□ -1.33
TRIM38O00635 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
TRIM38O00635 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM38O00635 AC022034.1-201ENST00000512867 2156 ntBASIC6.72□□□□□ -1.33
TRIM38O00635 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
TRIM38O00635 AL078595.2-201ENST00000605309 1780 ntBASIC6.72□□□□□ -1.33
TRIM38O00635 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM38O00635 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM38O00635 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM38O00635 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.72□□□□□ -1.33
TRIM38O00635 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM38O00635 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.72□□□□□ -1.33
TRIM38O00635 AC079949.2-201ENST00000617117 2933 ntBASIC6.72□□□□□ -1.33
TRIM38O00635 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.72□□□□□ -1.33
TRIM38O00635 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM38O00635 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.72□□□□□ -1.33
TRIM38O00635 NAMPTP1-201ENST00000440465 2514 ntBASIC6.72□□□□□ -1.33
TRIM38O00635 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
TRIM38O00635 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
TRIM38O00635 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM38O00635 RNU6-697P-201ENST00000363348 107 ntBASIC6.72□□□□□ -1.33
TRIM38O00635 RNU6-1331P-201ENST00000363658 106 ntBASIC6.72□□□□□ -1.33
TRIM38O00635 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM38O00635 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
TRIM38O00635 AC098592.2-201ENST00000413158 265 ntBASIC6.72□□□□□ -1.33
TRIM38O00635 AL359885.1-201ENST00000415786 903 ntBASIC6.72□□□□□ -1.33
TRIM38O00635 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC6.72□□□□□ -1.33
TRIM38O00635 TIMM8BP2-201ENST00000445940 251 ntBASIC6.72□□□□□ -1.33
TRIM38O00635 AKR1D1P1-201ENST00000457236 936 ntBASIC6.72□□□□□ -1.33
TRIM38O00635 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM38O00635 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6.72□□□□□ -1.33
TRIM38O00635 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.72□□□□□ -1.33
TRIM38O00635 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms