Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC232271.1-201ENST00000602455 2715 ntBASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 GLYATL1P1-201ENST00000528297 1607 ntBASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 SMG1P5-202ENST00000529428 4219 ntBASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 SMG1P2-201ENST00000566127 4221 ntBASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 PPIAP24-201ENST00000328558 471 ntBASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 RNA5SP140-201ENST00000364524 92 ntBASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 RN7SKP186-201ENST00000365371 303 ntBASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 AC245036.1-201ENST00000391727 309 ntBASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 RPL5P20-201ENST00000403848 896 ntBASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 HNRNPA1P18-201ENST00000433537 927 ntBASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 AL590399.4-201ENST00000436561 601 ntBASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 AC234771.4-201ENST00000441416 730 ntBASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 SETP4-201ENST00000455717 868 ntBASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 AKR1D1P1-201ENST00000457236 936 ntBASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 RPL23AP64-201ENST00000469465 435 ntBASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 MTCO1P55-201ENST00000489829 745 ntBASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 AC009567.2-201ENST00000502989 349 ntBASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 TBCA-209ENST00000522370 435 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 AC023245.2-201ENST00000530760 2978 ntBASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 AL157762.1-201ENST00000619612 415 ntBASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 AC018628.1-201ENST00000624147 3819 ntBASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 BTK-209ENST00000618050 2417 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 NSF-206ENST00000575068 2667 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DRB4X5D2U9 AC025470.1-201ENST00000510053 2032 ntBASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 AC092724.1-201ENST00000624623 3397 ntBASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 AC092634.1-201ENST00000366505 199 ntBASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 MRPS6P2-201ENST00000381143 370 ntBASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 HMGA1P8-201ENST00000414130 321 ntBASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 RPL23AP85-201ENST00000421838 433 ntBASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 CCNJP1-201ENST00000450600 1149 ntBASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 RPL31P11-202ENST00000454082 372 ntBASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 RPSAP24-201ENST00000461543 873 ntBASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 RPL24-206ENST00000495401 478 ntTSL 2 BASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 RPL19P11-201ENST00000495944 589 ntBASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 AC091965.3-201ENST00000506236 208 ntBASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 NREP-217ENST00000509025 987 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 NREP-223ENST00000515855 801 ntTSL 4 BASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 AC131935.1-201ENST00000524621 333 ntBASIC4.85□□□□□ -1.63
HLA-DRB4X5D2U9 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms