Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC096921.2-201ENST00000561507 1916 ntBASIC7.04□□□□□ -1.28
TPM4P67936 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
TPM4P67936 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
TPM4P67936 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
TPM4P67936 SNORD16-201ENST00000362803 99 ntBASIC7.04□□□□□ -1.28
TPM4P67936 MEG8-201ENST00000414488 800 ntTSL 3 BASIC7.04□□□□□ -1.28
TPM4P67936 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.04□□□□□ -1.28
TPM4P67936 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC7.04□□□□□ -1.28
TPM4P67936 NME1P1-201ENST00000420914 382 ntBASIC7.04□□□□□ -1.28
TPM4P67936 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC7.04□□□□□ -1.28
TPM4P67936 RBMY2JP-201ENST00000425544 1059 ntBASIC7.04□□□□□ -1.28
TPM4P67936 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC7.04□□□□□ -1.28
TPM4P67936 CR391992.1-201ENST00000438601 394 ntBASIC7.04□□□□□ -1.28
TPM4P67936 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.04□□□□□ -1.28
TPM4P67936 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC7.04□□□□□ -1.28
TPM4P67936 AC092421.1-201ENST00000448148 418 ntBASIC7.04□□□□□ -1.28
TPM4P67936 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.04□□□□□ -1.28
TPM4P67936 RPS27AP3-201ENST00000453803 454 ntBASIC7.04□□□□□ -1.28
TPM4P67936 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.04□□□□□ -1.28
TPM4P67936 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.04□□□□□ -1.28
TPM4P67936 AC010343.2-201ENST00000510162 224 ntBASIC7.04□□□□□ -1.28
TPM4P67936 AC008429.4-201ENST00000521201 182 ntBASIC7.04□□□□□ -1.28
TPM4P67936 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC7.04□□□□□ -1.28
TPM4P67936 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC7.04□□□□□ -1.28
TPM4P67936 MIR3189-201ENST00000578735 73 ntBASIC7.04□□□□□ -1.28
TPM4P67936 AC011193.2-201ENST00000582638 367 ntBASIC7.04□□□□□ -1.28
TPM4P67936 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC7.04□□□□□ -1.28
TPM4P67936 AL035417.2-201ENST00000603887 796 ntBASIC7.04□□□□□ -1.28
TPM4P67936 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC7.04□□□□□ -1.28
TPM4P67936 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC7.04□□□□□ -1.28
TPM4P67936 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
TPM4P67936 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
TPM4P67936 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC7.04□□□□□ -1.28
TPM4P67936 AC114876.1-201ENST00000490962 1366 ntBASIC7.04□□□□□ -1.28
TPM4P67936 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
TPM4P67936 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC7.04□□□□□ -1.28
TPM4P67936 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7.04□□□□□ -1.28
TPM4P67936 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
TPM4P67936 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
TPM4P67936 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
TPM4P67936 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
TPM4P67936 TUBBP10-201ENST00000427668 1301 ntBASIC7.03□□□□□ -1.28
TPM4P67936 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
TPM4P67936 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
TPM4P67936 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
TPM4P67936 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
TPM4P67936 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC7.03□□□□□ -1.28
TPM4P67936 DCN-218ENST00000551354 2924 ntTSL 3 BASIC7.03□□□□□ -1.28
TPM4P67936 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TPM4P67936 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
TPM4P67936 AC239868.2-201ENST00000564237 4527 ntBASIC7.03□□□□□ -1.28
TPM4P67936 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TPM4P67936 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC7.03□□□□□ -1.28
TPM4P67936 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC7.03□□□□□ -1.28
TPM4P67936 RPL12P10-201ENST00000413498 498 ntBASIC7.03□□□□□ -1.28
TPM4P67936 SMARCE1P1-201ENST00000417747 1186 ntBASIC7.03□□□□□ -1.28
TPM4P67936 AL157884.1-201ENST00000424561 454 ntBASIC7.03□□□□□ -1.28
TPM4P67936 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC7.03□□□□□ -1.28
TPM4P67936 PHBP4-201ENST00000437447 837 ntBASIC7.03□□□□□ -1.28
TPM4P67936 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC7.03□□□□□ -1.28
TPM4P67936 OR9A1P-202ENST00000484361 945 ntBASIC7.03□□□□□ -1.28
TPM4P67936 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC7.03□□□□□ -1.28
TPM4P67936 OR51A1P-201ENST00000511110 946 ntBASIC7.03□□□□□ -1.28
TPM4P67936 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
TPM4P67936 DCN-215ENST00000550099 719 ntTSL 2 BASIC7.03□□□□□ -1.28
TPM4P67936 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.03□□□□□ -1.28
TPM4P67936 SNORD96A-201ENST00000606577 79 ntBASIC7.03□□□□□ -1.28
TPM4P67936 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC7.03□□□□□ -1.28
TPM4P67936 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC7.03□□□□□ -1.28
TPM4P67936 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
TPM4P67936 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC7.03□□□□□ -1.28
TPM4P67936 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TPM4P67936 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
TPM4P67936 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TPM4P67936 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TPM4P67936 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC7.03□□□□□ -1.28
TPM4P67936 AC025470.1-201ENST00000510053 2032 ntBASIC7.03□□□□□ -1.28
TPM4P67936 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
TPM4P67936 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TPM4P67936 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.28
TPM4P67936 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC7.02□□□□□ -1.28
TPM4P67936 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC7.02□□□□□ -1.28
TPM4P67936 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TPM4P67936 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
TPM4P67936 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC7.02□□□□□ -1.29
TPM4P67936 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
TPM4P67936 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
TPM4P67936 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TPM4P67936 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TPM4P67936 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
TPM4P67936 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC7.02□□□□□ -1.29
TPM4P67936 SNORD1C-201ENST00000363315 78 ntBASIC7.02□□□□□ -1.29
TPM4P67936 RNA5SP427-201ENST00000365323 119 ntBASIC7.02□□□□□ -1.29
TPM4P67936 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
TPM4P67936 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC7.02□□□□□ -1.29
TPM4P67936 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC7.02□□□□□ -1.29
TPM4P67936 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC7.02□□□□□ -1.29
TPM4P67936 AL596268.1-201ENST00000427910 1048 ntBASIC7.02□□□□□ -1.29
TPM4P67936 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC7.02□□□□□ -1.29
TPM4P67936 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms