Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 LYARP1-201ENST00000436977 1501 ntBASIC5.26□□□□□ -1.57
LMO4P61968 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LMO4P61968 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
LMO4P61968 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC5.26□□□□□ -1.57
LMO4P61968 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LMO4P61968 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
LMO4P61968 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LMO4P61968 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LMO4P61968 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LMO4P61968 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
LMO4P61968 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
LMO4P61968 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LMO4P61968 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LMO4P61968 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC5.26□□□□□ -1.57
LMO4P61968 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
LMO4P61968 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.26□□□□□ -1.57
LMO4P61968 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC5.26□□□□□ -1.57
LMO4P61968 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LMO4P61968 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5.25□□□□□ -1.57
LMO4P61968 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LMO4P61968 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC5.25□□□□□ -1.57
LMO4P61968 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC5.25□□□□□ -1.57
LMO4P61968 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
LMO4P61968 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
LMO4P61968 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LMO4P61968 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC5.25□□□□□ -1.57
LMO4P61968 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LMO4P61968 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LMO4P61968 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LMO4P61968 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
LMO4P61968 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
LMO4P61968 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC5.25□□□□□ -1.57
LMO4P61968 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC5.25□□□□□ -1.57
LMO4P61968 RNA5SP346-201ENST00000363541 121 ntBASIC5.25□□□□□ -1.57
LMO4P61968 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.25□□□□□ -1.57
LMO4P61968 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LMO4P61968 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.25□□□□□ -1.57
LMO4P61968 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.25□□□□□ -1.57
LMO4P61968 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.25□□□□□ -1.57
LMO4P61968 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.25□□□□□ -1.57
LMO4P61968 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.25□□□□□ -1.57
LMO4P61968 GAPDHP16-201ENST00000448152 962 ntBASIC5.25□□□□□ -1.57
LMO4P61968 AC016724.1-201ENST00000453215 421 ntBASIC5.25□□□□□ -1.57
LMO4P61968 BZW1P1-201ENST00000454901 1240 ntBASIC5.25□□□□□ -1.57
LMO4P61968 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.25□□□□□ -1.57
LMO4P61968 AC068228.1-201ENST00000461723 211 ntBASIC5.25□□□□□ -1.57
LMO4P61968 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.25□□□□□ -1.57
LMO4P61968 SNORA58-201ENST00000505219 137 ntBASIC5.25□□□□□ -1.57
LMO4P61968 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.25□□□□□ -1.57
LMO4P61968 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.25□□□□□ -1.57
LMO4P61968 RNU6-751P-201ENST00000516382 101 ntBASIC5.25□□□□□ -1.57
LMO4P61968 IGKV1D-22-201ENST00000518953 324 ntBASIC5.25□□□□□ -1.57
LMO4P61968 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.25□□□□□ -1.57
LMO4P61968 AP004609.2-201ENST00000532177 190 ntBASIC5.25□□□□□ -1.57
LMO4P61968 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.25□□□□□ -1.57
LMO4P61968 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.25□□□□□ -1.57
LMO4P61968 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.25□□□□□ -1.57
LMO4P61968 OR7A11P-201ENST00000597719 953 ntBASIC5.25□□□□□ -1.57
LMO4P61968 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LMO4P61968 AL138895.2-201ENST00000603019 178 ntBASIC5.25□□□□□ -1.57
LMO4P61968 AC015982.1-201ENST00000608113 465 ntBASIC5.25□□□□□ -1.57
LMO4P61968 AL365181.4-201ENST00000609800 547 ntBASIC5.25□□□□□ -1.57
LMO4P61968 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.25□□□□□ -1.57
LMO4P61968 AC069542.2-201ENST00000624816 216 ntBASIC5.25□□□□□ -1.57
LMO4P61968 AL132640.3-201ENST00000630473 177 ntBASIC5.25□□□□□ -1.57
LMO4P61968 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LMO4P61968 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
LMO4P61968 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LMO4P61968 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LMO4P61968 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.25□□□□□ -1.57
LMO4P61968 AL359976.1-201ENST00000418655 3528 ntBASIC5.25□□□□□ -1.57
LMO4P61968 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC5.25□□□□□ -1.57
LMO4P61968 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LMO4P61968 EPS15P1-202ENST00000459691 2071 ntBASIC5.25□□□□□ -1.57
LMO4P61968 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
LMO4P61968 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC5.25□□□□□ -1.57
LMO4P61968 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
LMO4P61968 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC5.25□□□□□ -1.57
LMO4P61968 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LMO4P61968 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LMO4P61968 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LMO4P61968 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LMO4P61968 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
LMO4P61968 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.24□□□□□ -1.57
LMO4P61968 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.24□□□□□ -1.57
LMO4P61968 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC5.24□□□□□ -1.57
LMO4P61968 OR4G1P-202ENST00000641173 1788 ntBASIC5.24□□□□□ -1.57
LMO4P61968 NBPF8-201ENST00000583271 5330 ntBASIC5.24□□□□□ -1.57
LMO4P61968 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LMO4P61968 AC093225.1-201ENST00000506867 1408 ntBASIC5.24□□□□□ -1.57
LMO4P61968 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
LMO4P61968 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
LMO4P61968 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LMO4P61968 COG2-209ENST00000534989 2963 ntTSL 2 BASIC5.24□□□□□ -1.57
LMO4P61968 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LMO4P61968 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.24□□□□□ -1.57
LMO4P61968 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
LMO4P61968 CTNNA1P1-201ENST00000515849 2728 ntBASIC5.24□□□□□ -1.57
LMO4P61968 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC5.24□□□□□ -1.57
LMO4P61968 RNA5SP110-201ENST00000362638 115 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms