Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 ATP6V1G1P4-201ENST00000438388 335 ntBASIC4.9□□□□□ -1.63
HLA-DMBP28068 H3F3BP1-201ENST00000440551 403 ntBASIC4.9□□□□□ -1.63
HLA-DMBP28068 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC4.9□□□□□ -1.63
HLA-DMBP28068 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC4.9□□□□□ -1.63
HLA-DMBP28068 AL034369.1-201ENST00000453808 477 ntBASIC4.9□□□□□ -1.63
HLA-DMBP28068 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC4.9□□□□□ -1.63
HLA-DMBP28068 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC4.9□□□□□ -1.63
HLA-DMBP28068 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC4.9□□□□□ -1.63
HLA-DMBP28068 RN7SL70P-201ENST00000478322 302 ntBASIC4.9□□□□□ -1.63
HLA-DMBP28068 RPS7P11-201ENST00000484240 586 ntBASIC4.9□□□□□ -1.63
HLA-DMBP28068 EIF4E2P2-201ENST00000492033 736 ntBASIC4.9□□□□□ -1.63
HLA-DMBP28068 SNRPCP11-201ENST00000492453 205 ntBASIC4.9□□□□□ -1.63
HLA-DMBP28068 AC091965.3-201ENST00000506236 208 ntBASIC4.9□□□□□ -1.63
HLA-DMBP28068 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC4.9□□□□□ -1.63
HLA-DMBP28068 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC4.9□□□□□ -1.63
HLA-DMBP28068 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC4.9□□□□□ -1.63
HLA-DMBP28068 RN7SKP67-201ENST00000515905 235 ntBASIC4.9□□□□□ -1.63
HLA-DMBP28068 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC4.9□□□□□ -1.63
HLA-DMBP28068 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC4.9□□□□□ -1.63
HLA-DMBP28068 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DMBP28068 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC4.9□□□□□ -1.63
HLA-DMBP28068 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC4.9□□□□□ -1.63
HLA-DMBP28068 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC4.9□□□□□ -1.63
HLA-DMBP28068 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC4.9□□□□□ -1.63
HLA-DMBP28068 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC4.9□□□□□ -1.63
HLA-DMBP28068 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC4.9□□□□□ -1.63
HLA-DMBP28068 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC4.9□□□□□ -1.63
HLA-DMBP28068 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.9□□□□□ -1.63
HLA-DMBP28068 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC4.9□□□□□ -1.63
HLA-DMBP28068 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DMBP28068 AC091133.5-201ENST00000603088 301 ntBASIC4.9□□□□□ -1.63
HLA-DMBP28068 RPS4XP21-201ENST00000603814 750 ntBASIC4.9□□□□□ -1.63
HLA-DMBP28068 DIMT1P1-201ENST00000603970 763 ntBASIC4.9□□□□□ -1.63
HLA-DMBP28068 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC4.9□□□□□ -1.63
HLA-DMBP28068 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DMBP28068 MIR6849-201ENST00000618543 69 ntBASIC4.9□□□□□ -1.63
HLA-DMBP28068 AC127071.2-201ENST00000623293 527 ntBASIC4.9□□□□□ -1.63
HLA-DMBP28068 AL132640.3-201ENST00000630473 177 ntBASIC4.9□□□□□ -1.63
HLA-DMBP28068 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DMBP28068 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DMBP28068 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DMBP28068 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DMBP28068 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DMBP28068 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DMBP28068 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DMBP28068 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DMBP28068 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC4.9□□□□□ -1.63
HLA-DMBP28068 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DMBP28068 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DMBP28068 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DMBP28068 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DMBP28068 AC119674.1-213ENST00000641177 1386 ntBASIC4.9□□□□□ -1.63
HLA-DMBP28068 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HLA-DMBP28068 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DMBP28068 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC4.89□□□□□ -1.63
HLA-DMBP28068 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DMBP28068 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DMBP28068 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DMBP28068 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DMBP28068 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DMBP28068 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
HLA-DMBP28068 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DMBP28068 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DMBP28068 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DMBP28068 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DMBP28068 AC092724.1-201ENST00000624623 3397 ntBASIC4.89□□□□□ -1.63
HLA-DMBP28068 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
HLA-DMBP28068 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DMBP28068 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HLA-DMBP28068 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HLA-DMBP28068 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DMBP28068 RPL12P23-201ENST00000405880 490 ntBASIC4.89□□□□□ -1.63
HLA-DMBP28068 RNA5SP155-201ENST00000411154 129 ntBASIC4.89□□□□□ -1.63
HLA-DMBP28068 AL929472.1-201ENST00000417484 429 ntBASIC4.89□□□□□ -1.63
HLA-DMBP28068 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DMBP28068 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
HLA-DMBP28068 KF459542.1-201ENST00000450908 553 ntBASIC4.89□□□□□ -1.63
HLA-DMBP28068 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
HLA-DMBP28068 RN7SL165P-201ENST00000477476 291 ntBASIC4.89□□□□□ -1.63
HLA-DMBP28068 AC044810.1-201ENST00000480271 711 ntBASIC4.89□□□□□ -1.63
HLA-DMBP28068 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DMBP28068 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DMBP28068 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DMBP28068 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HLA-DMBP28068 OR4C49P-201ENST00000563891 900 ntBASIC4.89□□□□□ -1.63
HLA-DMBP28068 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DMBP28068 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DMBP28068 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DMBP28068 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HLA-DMBP28068 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC4.89□□□□□ -1.63
HLA-DMBP28068 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DMBP28068 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DMBP28068 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DMBP28068 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DMBP28068 AC245052.7-201ENST00000601161 359 ntBASIC4.89□□□□□ -1.63
HLA-DMBP28068 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DMBP28068 AL390877.1-201ENST00000605704 214 ntBASIC4.89□□□□□ -1.63
HLA-DMBP28068 MIR6885-201ENST00000612241 66 ntBASIC4.89□□□□□ -1.63
HLA-DMBP28068 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DMBP28068 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms