Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC8.12□□□□□ -1.11
LIG1P18858 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LIG1P18858 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LIG1P18858 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC8.12□□□□□ -1.11
LIG1P18858 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC8.12□□□□□ -1.11
LIG1P18858 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC8.12□□□□□ -1.11
LIG1P18858 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LIG1P18858 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC8.12□□□□□ -1.11
LIG1P18858 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC8.12□□□□□ -1.11
LIG1P18858 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LIG1P18858 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LIG1P18858 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
LIG1P18858 RPL12P1-201ENST00000374520 498 ntBASIC8.12□□□□□ -1.11
LIG1P18858 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC8.12□□□□□ -1.11
LIG1P18858 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC8.12□□□□□ -1.11
LIG1P18858 AC241520.1-201ENST00000422654 1099 ntBASIC8.12□□□□□ -1.11
LIG1P18858 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC8.12□□□□□ -1.11
LIG1P18858 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC8.12□□□□□ -1.11
LIG1P18858 AL121916.1-201ENST00000429405 308 ntBASIC8.12□□□□□ -1.11
LIG1P18858 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC8.12□□□□□ -1.11
LIG1P18858 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LIG1P18858 PRDX1P1-201ENST00000449329 596 ntBASIC8.12□□□□□ -1.11
LIG1P18858 NDUFB4P1-201ENST00000462398 381 ntBASIC8.12□□□□□ -1.11
LIG1P18858 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC8.12□□□□□ -1.11
LIG1P18858 PGAM4P2-201ENST00000512491 721 ntBASIC8.12□□□□□ -1.11
LIG1P18858 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC8.12□□□□□ -1.11
LIG1P18858 AP001994.1-201ENST00000527539 826 ntBASIC8.12□□□□□ -1.11
LIG1P18858 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC8.12□□□□□ -1.11
LIG1P18858 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC8.12□□□□□ -1.11
LIG1P18858 AL132640.2-202ENST00000559732 614 ntBASIC8.12□□□□□ -1.11
LIG1P18858 UBE2CP4-201ENST00000561405 535 ntBASIC8.12□□□□□ -1.11
LIG1P18858 EXOSC3P2-201ENST00000594464 497 ntBASIC8.12□□□□□ -1.11
LIG1P18858 AL031429.2-201ENST00000602605 649 ntBASIC8.12□□□□□ -1.11
LIG1P18858 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC8.12□□□□□ -1.11
LIG1P18858 AC104184.1-201ENST00000607513 721 ntBASIC8.12□□□□□ -1.11
LIG1P18858 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
LIG1P18858 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LIG1P18858 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC8.12□□□□□ -1.11
LIG1P18858 AC104837.1-201ENST00000444644 1587 ntBASIC8.12□□□□□ -1.11
LIG1P18858 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC8.12□□□□□ -1.11
LIG1P18858 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LIG1P18858 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LIG1P18858 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LIG1P18858 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
LIG1P18858 TATDN2P3-201ENST00000452855 3665 ntBASIC8.12□□□□□ -1.11
LIG1P18858 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LIG1P18858 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LIG1P18858 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC8.12□□□□□ -1.11
LIG1P18858 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LIG1P18858 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LIG1P18858 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LIG1P18858 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LIG1P18858 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC8.12□□□□□ -1.11
LIG1P18858 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LIG1P18858 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LIG1P18858 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC8.11□□□□□ -1.11
LIG1P18858 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LIG1P18858 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
LIG1P18858 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LIG1P18858 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LIG1P18858 AL136298.2-201ENST00000556497 1570 ntBASIC8.11□□□□□ -1.11
LIG1P18858 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LIG1P18858 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
LIG1P18858 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
LIG1P18858 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LIG1P18858 RNU6-298P-201ENST00000390888 96 ntBASIC8.11□□□□□ -1.11
LIG1P18858 RPL9P21-201ENST00000392269 505 ntBASIC8.11□□□□□ -1.11
LIG1P18858 GAPDHP15-201ENST00000398586 975 ntBASIC8.11□□□□□ -1.11
LIG1P18858 RPL5P19-201ENST00000404228 893 ntBASIC8.11□□□□□ -1.11
LIG1P18858 RMRPP5-201ENST00000411156 267 ntBASIC8.11□□□□□ -1.11
LIG1P18858 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC8.11□□□□□ -1.11
LIG1P18858 OR7E117P-201ENST00000422682 1112 ntBASIC8.11□□□□□ -1.11
LIG1P18858 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC8.11□□□□□ -1.11
LIG1P18858 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC8.11□□□□□ -1.11
LIG1P18858 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC8.11□□□□□ -1.11
LIG1P18858 SOCS5P1-201ENST00000440415 949 ntBASIC8.11□□□□□ -1.11
LIG1P18858 PRKAR1AP1-201ENST00000441422 1162 ntBASIC8.11□□□□□ -1.11
LIG1P18858 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC8.11□□□□□ -1.11
LIG1P18858 XKRY2-201ENST00000442362 1093 ntBASIC8.11□□□□□ -1.11
LIG1P18858 VN1R25P-201ENST00000443385 738 ntBASIC8.11□□□□□ -1.11
LIG1P18858 OR51P1P-201ENST00000447547 942 ntBASIC8.11□□□□□ -1.11
LIG1P18858 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC8.11□□□□□ -1.11
LIG1P18858 NPM1P19-201ENST00000450070 712 ntBASIC8.11□□□□□ -1.11
LIG1P18858 HNRNPDLP2-201ENST00000455248 751 ntBASIC8.11□□□□□ -1.11
LIG1P18858 CEACAMP3-202ENST00000483806 638 ntBASIC8.11□□□□□ -1.11
LIG1P18858 RN7SL152P-201ENST00000484176 298 ntBASIC8.11□□□□□ -1.11
LIG1P18858 MTCO3P35-201ENST00000485582 781 ntBASIC8.11□□□□□ -1.11
LIG1P18858 AC008427.1-201ENST00000503102 655 ntBASIC8.11□□□□□ -1.11
LIG1P18858 AC010486.2-201ENST00000505572 483 ntBASIC8.11□□□□□ -1.11
LIG1P18858 RN7SKP242-201ENST00000515967 289 ntBASIC8.11□□□□□ -1.11
LIG1P18858 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC8.11□□□□□ -1.11
LIG1P18858 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC8.11□□□□□ -1.11
LIG1P18858 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC8.11□□□□□ -1.11
LIG1P18858 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC8.11□□□□□ -1.11
LIG1P18858 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC8.11□□□□□ -1.11
LIG1P18858 AC011611.6-201ENST00000547483 255 ntBASIC8.11□□□□□ -1.11
LIG1P18858 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LIG1P18858 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC8.11□□□□□ -1.11
LIG1P18858 AC244034.2-201ENST00000562504 509 ntBASIC8.11□□□□□ -1.11
LIG1P18858 AC109446.2-201ENST00000567872 497 ntBASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms