Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 AKAP17BP-201ENST00000431706 2719 ntBASIC6.81□□□□□ -1.32
DKK3Q9UBP4 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 CRYGGP-201ENST00000443337 145 ntBASIC6.81□□□□□ -1.32
DKK3Q9UBP4 CEACAMP5-201ENST00000448037 961 ntBASIC6.81□□□□□ -1.32
DKK3Q9UBP4 AL445991.1-201ENST00000450381 475 ntBASIC6.81□□□□□ -1.32
DKK3Q9UBP4 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 RN7SL168P-201ENST00000463821 279 ntBASIC6.81□□□□□ -1.32
DKK3Q9UBP4 AC099340.1-201ENST00000475247 599 ntBASIC6.81□□□□□ -1.32
DKK3Q9UBP4 AC074386.1-206ENST00000487102 761 ntBASIC6.81□□□□□ -1.32
DKK3Q9UBP4 AC106806.2-201ENST00000509365 500 ntBASIC6.81□□□□□ -1.32
DKK3Q9UBP4 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 AC011352.2-201ENST00000514574 1016 ntBASIC6.81□□□□□ -1.32
DKK3Q9UBP4 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.81□□□□□ -1.32
DKK3Q9UBP4 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 AL139022.2-201ENST00000606934 443 ntBASIC6.81□□□□□ -1.32
DKK3Q9UBP4 AC211486.4-201ENST00000621495 113 ntBASIC6.81□□□□□ -1.32
DKK3Q9UBP4 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.81□□□□□ -1.32
DKK3Q9UBP4 CDY10P-201ENST00000452415 1567 ntBASIC6.81□□□□□ -1.32
DKK3Q9UBP4 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 AC093297.3-201ENST00000607056 2517 ntBASIC6.81□□□□□ -1.32
DKK3Q9UBP4 AC018628.1-201ENST00000624147 3819 ntBASIC6.81□□□□□ -1.32
DKK3Q9UBP4 AP000432.2-201ENST00000624164 2048 ntBASIC6.81□□□□□ -1.32
DKK3Q9UBP4 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
DKK3Q9UBP4 AL442128.2-201ENST00000620246 1824 ntBASIC6.8□□□□□ -1.32
DKK3Q9UBP4 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
DKK3Q9UBP4 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.8□□□□□ -1.32
DKK3Q9UBP4 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
DKK3Q9UBP4 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
DKK3Q9UBP4 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
DKK3Q9UBP4 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.8□□□□□ -1.32
DKK3Q9UBP4 RNU1-55P-201ENST00000365510 158 ntBASIC6.8□□□□□ -1.32
DKK3Q9UBP4 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
DKK3Q9UBP4 AL590635.1-201ENST00000406314 586 ntBASIC6.8□□□□□ -1.32
DKK3Q9UBP4 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC6.8□□□□□ -1.32
DKK3Q9UBP4 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC6.8□□□□□ -1.32
DKK3Q9UBP4 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.8□□□□□ -1.32
DKK3Q9UBP4 AC064862.5-201ENST00000440618 334 ntBASIC6.8□□□□□ -1.32
DKK3Q9UBP4 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.8□□□□□ -1.32
DKK3Q9UBP4 MTCO3P43-201ENST00000440974 771 ntBASIC6.8□□□□□ -1.32
DKK3Q9UBP4 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.8□□□□□ -1.32
DKK3Q9UBP4 AL390728.3-201ENST00000452704 270 ntBASIC6.8□□□□□ -1.32
DKK3Q9UBP4 EIF4A2P2-201ENST00000455776 1070 ntBASIC6.8□□□□□ -1.32
DKK3Q9UBP4 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
DKK3Q9UBP4 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.8□□□□□ -1.32
DKK3Q9UBP4 AC091849.1-201ENST00000509920 121 ntBASIC6.8□□□□□ -1.32
DKK3Q9UBP4 CCNHP1-201ENST00000513311 678 ntBASIC6.8□□□□□ -1.32
DKK3Q9UBP4 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.8□□□□□ -1.32
DKK3Q9UBP4 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.8□□□□□ -1.32
DKK3Q9UBP4 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.8□□□□□ -1.32
DKK3Q9UBP4 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.8□□□□□ -1.32
DKK3Q9UBP4 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
DKK3Q9UBP4 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.8□□□□□ -1.32
DKK3Q9UBP4 RN7SL270P-201ENST00000579643 281 ntBASIC6.8□□□□□ -1.32
DKK3Q9UBP4 MIR4433B-201ENST00000581329 102 ntBASIC6.8□□□□□ -1.32
DKK3Q9UBP4 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.8□□□□□ -1.32
DKK3Q9UBP4 AC091133.5-201ENST00000603088 301 ntBASIC6.8□□□□□ -1.32
DKK3Q9UBP4 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.8□□□□□ -1.32
DKK3Q9UBP4 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.8□□□□□ -1.32
DKK3Q9UBP4 AC005514.1-201ENST00000623521 208 ntBASIC6.8□□□□□ -1.32
DKK3Q9UBP4 MTCO1P1-201ENST00000624263 1081 ntBASIC6.8□□□□□ -1.32
DKK3Q9UBP4 AC027559.1-201ENST00000636288 271 ntBASIC6.8□□□□□ -1.32
DKK3Q9UBP4 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
DKK3Q9UBP4 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
DKK3Q9UBP4 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.8□□□□□ -1.32
DKK3Q9UBP4 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
DKK3Q9UBP4 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
DKK3Q9UBP4 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.79□□□□□ -1.32
DKK3Q9UBP4 AC067942.1-201ENST00000488045 1493 ntBASIC6.79□□□□□ -1.32
DKK3Q9UBP4 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
DKK3Q9UBP4 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
DKK3Q9UBP4 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
DKK3Q9UBP4 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
DKK3Q9UBP4 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
DKK3Q9UBP4 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms