Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC009283.1-201ENST00000615852 645 ntBASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 AP005212.3-201ENST00000619964 528 ntBASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 AL138693.1-201ENST00000622219 129 ntBASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 AL162377.2-201ENST00000624532 337 ntBASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 AC096992.2-201ENST00000609553 1684 ntBASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 AL662795.2-201ENST00000624252 3706 ntBASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 AC007485.2-201ENST00000623493 1667 ntBASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 RNA5SP65-201ENST00000363166 119 ntBASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 MIR621-201ENST00000384919 96 ntBASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 SNORA11D-201ENST00000408548 128 ntBASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 SNORA11E-201ENST00000408778 128 ntBASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 RN7SKP188-201ENST00000410789 317 ntBASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 OR13Z1P-201ENST00000416141 834 ntBASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 VDAC1P10-201ENST00000416715 891 ntBASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 AL592114.2-201ENST00000440142 532 ntBASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 RPL29P7-201ENST00000440227 457 ntBASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 RAB28P2-201ENST00000454299 641 ntBASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 AC117395.1-201ENST00000487390 403 ntBASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 RN7SL143P-201ENST00000496780 297 ntBASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 AC010468.3-201ENST00000508225 458 ntBASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 CFI-204ENST00000510800 667 ntTSL 2 BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 IGLVV-66-201ENST00000523818 341 ntBASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 NXPE2P1-201ENST00000543705 726 ntBASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 DPPA3P2-201ENST00000553589 478 ntBASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 AC090971.3-201ENST00000557871 1041 ntBASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 FAM30C-201ENST00000561158 410 ntBASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 CD24P2-201ENST00000565486 219 ntBASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 EIF4A3P1-201ENST00000578499 647 ntBASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 RN7SL339P-201ENST00000580597 296 ntBASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 AC007683.2-201ENST00000624681 714 ntBASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 AC018659.2-201ENST00000624690 715 ntBASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 TMEM30CP-203ENST00000637814 1035 ntBASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 JAML-213ENST00000640745 951 ntTSL 5 BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 AC110792.3-201ENST00000595906 1614 ntBASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
AMBRA1Q9C0C7 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
AMBRA1Q9C0C7 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.34□□□□□ -1.4
AMBRA1Q9C0C7 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
AMBRA1Q9C0C7 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
AMBRA1Q9C0C7 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
AMBRA1Q9C0C7 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 TMCC1P1-201ENST00000518897 1980 ntBASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms