Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 AC119674.1-204ENST00000641348 1343 ntBASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 SNORA70.3-201ENST00000365075 132 ntBASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 SNORD116-2-201ENST00000384274 95 ntBASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 SNORD116-6-201ENST00000384711 96 ntBASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 AL353692.2-201ENST00000407054 335 ntBASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 Z82198.3-201ENST00000421145 199 ntBASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 AL596268.1-201ENST00000427910 1048 ntBASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 VN1R108P-201ENST00000431580 830 ntBASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 GAPDHP19-201ENST00000431768 1005 ntBASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 MTND1P34-201ENST00000438556 671 ntBASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 AC064862.5-201ENST00000440618 334 ntBASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 CDY12P-201ENST00000440679 1015 ntBASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 CDY13P-201ENST00000445813 1015 ntBASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 UBBP5-201ENST00000446970 266 ntBASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 AC133965.1-201ENST00000452984 354 ntBASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 AKR1D1P1-201ENST00000457236 936 ntBASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 AK5-208ENST00000478255 556 ntTSL 2 BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 MTND2P32-201ENST00000521584 1038 ntBASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 RAB30-209ENST00000532548 644 ntTSL 3 BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 MRPS21P9-201ENST00000571150 257 ntBASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 CTSLP2-201ENST00000580501 394 ntBASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 ABI1P1-201ENST00000603375 1120 ntBASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 AP001033.2-201ENST00000609701 1003 ntBASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 AC131009.3-201ENST00000621809 287 ntBASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 MIR6503-201ENST00000622884 86 ntBASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 AL356490.1-201ENST00000623079 479 ntBASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 AC022507.1-201ENST00000548349 1505 ntBASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 AC010132.4-201ENST00000569883 1368 ntBASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 AC096656.1-201ENST00000623826 1364 ntBASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CDK5RAP1Q96SZ6 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 MIR541-201ENST00000401360 84 ntBASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 ZFAND6P1-201ENST00000434138 605 ntBASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 AC083855.1-201ENST00000440041 258 ntBASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 RPS18P1-201ENST00000447840 458 ntBASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 RPL26P30-201ENST00000453533 435 ntBASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 AC117395.1-201ENST00000487390 403 ntBASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 MTND1P22-201ENST00000510572 951 ntBASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 191.2 ms