Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC6.21□□□□□ -1.42
SNX18Q96RF0 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.21□□□□□ -1.42
SNX18Q96RF0 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.21□□□□□ -1.42
SNX18Q96RF0 OR2A3P-201ENST00000493774 953 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.21□□□□□ -1.42
SNX18Q96RF0 AC093815.1-201ENST00000508637 280 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC6.21□□□□□ -1.42
SNX18Q96RF0 AC011352.2-201ENST00000514574 1016 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 AC117525.1-201ENST00000515228 503 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 RNA5SP518-201ENST00000515957 119 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 OR5M4P-201ENST00000529436 925 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 OR8X1P-201ENST00000534542 869 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.21□□□□□ -1.42
SNX18Q96RF0 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC6.21□□□□□ -1.42
SNX18Q96RF0 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.21□□□□□ -1.42
SNX18Q96RF0 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.21□□□□□ -1.42
SNX18Q96RF0 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC6.21□□□□□ -1.42
SNX18Q96RF0 AC104072.1-201ENST00000568817 668 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 RN7SL199P-201ENST00000578752 281 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 RN7SL131P-201ENST00000579043 256 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 RN7SL656P-201ENST00000579044 281 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.21□□□□□ -1.42
SNX18Q96RF0 RN7SL404P-201ENST00000582421 281 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC6.21□□□□□ -1.42
SNX18Q96RF0 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.21□□□□□ -1.42
SNX18Q96RF0 AC096947.1-201ENST00000603233 470 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 COX6CP16-201ENST00000603667 216 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 AC022001.1-201ENST00000605193 268 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 AC009283.1-201ENST00000615852 645 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 AC007671.1-201ENST00000616957 830 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 AP000770.2-201ENST00000623694 100 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 AP003108.4-201ENST00000623917 878 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 AC008993.2-201ENST00000631744 806 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SNX18Q96RF0 AL449283.1-201ENST00000602631 3403 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SNX18Q96RF0 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.21□□□□□ -1.42
SNX18Q96RF0 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SNX18Q96RF0 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SNX18Q96RF0 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.21□□□□□ -1.42
SNX18Q96RF0 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
SNX18Q96RF0 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
SNX18Q96RF0 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SNX18Q96RF0 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
SNX18Q96RF0 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SNX18Q96RF0 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SNX18Q96RF0 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 AC013488.1-201ENST00000526618 1838 ntBASIC6.2□□□□□ -1.42
SNX18Q96RF0 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SNX18Q96RF0 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SNX18Q96RF0 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SNX18Q96RF0 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SNX18Q96RF0 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 AC083837.1-201ENST00000565297 2994 ntBASIC6.2□□□□□ -1.42
SNX18Q96RF0 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SNX18Q96RF0 AC130360.2-201ENST00000533477 1556 ntBASIC6.2□□□□□ -1.42
SNX18Q96RF0 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SNX18Q96RF0 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
SNX18Q96RF0 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SNX18Q96RF0 RN7SKP47-201ENST00000365347 328 ntBASIC6.2□□□□□ -1.42
SNX18Q96RF0 AL359715.1-201ENST00000404330 555 ntBASIC6.2□□□□□ -1.42
SNX18Q96RF0 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 PTGES3P2-201ENST00000407942 482 ntBASIC6.2□□□□□ -1.42
SNX18Q96RF0 RNA5SP177-201ENST00000410122 107 ntBASIC6.2□□□□□ -1.42
SNX18Q96RF0 AC024937.2-201ENST00000411669 1242 ntBASIC6.2□□□□□ -1.42
SNX18Q96RF0 AL157698.1-201ENST00000415190 1011 ntBASIC6.2□□□□□ -1.42
SNX18Q96RF0 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SNX18Q96RF0 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 CYP4F34P-201ENST00000425951 481 ntBASIC6.2□□□□□ -1.42
SNX18Q96RF0 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 GTF3AP6-201ENST00000432585 986 ntBASIC6.2□□□□□ -1.42
SNX18Q96RF0 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 MTND1P26-201ENST00000440488 538 ntBASIC6.2□□□□□ -1.42
SNX18Q96RF0 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 AC073072.2-201ENST00000447425 348 ntBASIC6.2□□□□□ -1.42
SNX18Q96RF0 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 RPLP0P1-201ENST00000457002 361 ntBASIC6.2□□□□□ -1.42
SNX18Q96RF0 EIF3LP2-201ENST00000457262 807 ntBASIC6.2□□□□□ -1.42
SNX18Q96RF0 AL022319.1-201ENST00000458183 1167 ntBASIC6.2□□□□□ -1.42
SNX18Q96RF0 CBX5P1-201ENST00000468470 561 ntBASIC6.2□□□□□ -1.42
SNX18Q96RF0 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 CR383656.1-201ENST00000484916 377 ntBASIC6.2□□□□□ -1.42
SNX18Q96RF0 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 AC122714.1-201ENST00000502510 459 ntBASIC6.2□□□□□ -1.42
SNX18Q96RF0 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 AC114322.1-201ENST00000506771 926 ntBASIC6.2□□□□□ -1.42
SNX18Q96RF0 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 OXR1-212ENST00000521592 993 ntTSL 5 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 IGLVV-66-201ENST00000523818 341 ntBASIC6.2□□□□□ -1.42
SNX18Q96RF0 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SNX18Q96RF0 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms