Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 ASNSP4-201ENST00000511103 447 ntBASIC4.79□□□□□ -1.64
AP1S3Q96PC3 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 GTF2IP11-201ENST00000526931 420 ntBASIC4.79□□□□□ -1.64
AP1S3Q96PC3 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 AC010542.3-202ENST00000561728 701 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 AL157899.1-201ENST00000604110 936 ntBASIC4.79□□□□□ -1.64
AP1S3Q96PC3 AC024589.2-201ENST00000605642 1294 ntBASIC4.79□□□□□ -1.64
AP1S3Q96PC3 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 AC008626.2-201ENST00000624425 248 ntBASIC4.79□□□□□ -1.64
AP1S3Q96PC3 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 OR7A1P-202ENST00000641542 1158 ntBASIC4.79□□□□□ -1.64
AP1S3Q96PC3 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 AL359976.1-201ENST00000418655 3528 ntBASIC4.79□□□□□ -1.64
AP1S3Q96PC3 AC120036.2-201ENST00000509729 1474 ntBASIC4.79□□□□□ -1.64
AP1S3Q96PC3 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 EEF1A1P9-201ENST00000514975 1383 ntBASIC4.78□□□□□ -1.64
AP1S3Q96PC3 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 ZNF806-201ENST00000438300 1774 ntBASIC4.78□□□□□ -1.64
AP1S3Q96PC3 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 GOT2P1-201ENST00000440922 1309 ntBASIC4.78□□□□□ -1.64
AP1S3Q96PC3 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 SHQ1P1-201ENST00000437111 1544 ntBASIC4.78□□□□□ -1.64
AP1S3Q96PC3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 RNA5SP114-201ENST00000363780 113 ntBASIC4.78□□□□□ -1.64
AP1S3Q96PC3 S100A7-201ENST00000368722 442 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 RNA5SP177-201ENST00000410122 107 ntBASIC4.78□□□□□ -1.64
AP1S3Q96PC3 RN7SKP161-201ENST00000411110 305 ntBASIC4.78□□□□□ -1.64
AP1S3Q96PC3 RNA5SP115-201ENST00000411160 107 ntBASIC4.78□□□□□ -1.64
AP1S3Q96PC3 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 AC109638.1-201ENST00000417406 326 ntBASIC4.78□□□□□ -1.64
AP1S3Q96PC3 AC023141.1-201ENST00000419418 379 ntBASIC4.78□□□□□ -1.64
AP1S3Q96PC3 AC003989.1-201ENST00000434569 565 ntBASIC4.78□□□□□ -1.64
AP1S3Q96PC3 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 AC004692.1-201ENST00000455430 424 ntBASIC4.78□□□□□ -1.64
AP1S3Q96PC3 SNX18P26-201ENST00000458433 740 ntBASIC4.78□□□□□ -1.64
AP1S3Q96PC3 RN7SL492P-201ENST00000460700 295 ntBASIC4.78□□□□□ -1.64
AP1S3Q96PC3 SLC25A51P1-201ENST00000468432 871 ntBASIC4.78□□□□□ -1.64
AP1S3Q96PC3 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 RPL7AP23-201ENST00000482625 776 ntBASIC4.78□□□□□ -1.64
AP1S3Q96PC3 RN7SL143P-201ENST00000496780 297 ntBASIC4.78□□□□□ -1.64
AP1S3Q96PC3 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 MTCYBP44-201ENST00000514835 823 ntBASIC4.78□□□□□ -1.64
AP1S3Q96PC3 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 SNRPCP6-201ENST00000528310 210 ntBASIC4.78□□□□□ -1.64
AP1S3Q96PC3 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 AC091304.4-201ENST00000565703 620 ntBASIC4.78□□□□□ -1.64
AP1S3Q96PC3 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 OOSP1P2-201ENST00000579644 351 ntBASIC4.78□□□□□ -1.64
AP1S3Q96PC3 AC023389.2-201ENST00000580031 955 ntBASIC4.78□□□□□ -1.64
AP1S3Q96PC3 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC4.78□□□□□ -1.64
AP1S3Q96PC3 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 AC005277.2-201ENST00000617898 390 ntBASIC4.78□□□□□ -1.64
AP1S3Q96PC3 AC241377.1-201ENST00000619797 406 ntBASIC4.78□□□□□ -1.64
AP1S3Q96PC3 AC018692.2-201ENST00000624130 348 ntBASIC4.78□□□□□ -1.64
AP1S3Q96PC3 SNORA16A-202ENST00000628458 135 ntBASIC4.78□□□□□ -1.64
AP1S3Q96PC3 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.78□□□□□ -1.64
AP1S3Q96PC3 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms