Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC015802.2-201ENST00000589690 189 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 AC022146.1-201ENST00000595307 847 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 AC022239.4-201ENST00000602626 504 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 AC024060.1-201ENST00000607052 494 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 AC072046.2-201ENST00000618366 268 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 AP003068.4-201ENST00000623192 802 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 CD86-209ENST00000493101 1572 ntTSL 2 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 COL6A4P1-202ENST00000487147 4317 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 AL139805.2-201ENST00000455305 2433 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 RNA5SP79-201ENST00000365193 109 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 AC245052.5-201ENST00000416320 649 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 AC012519.1-201ENST00000424588 610 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 OR52S1P-201ENST00000427016 937 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 RNF11P2-201ENST00000427702 440 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 BX119917.1-201ENST00000432517 502 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 CYP2C56P-201ENST00000440076 291 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 AC092641.1-201ENST00000440229 772 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 RPL7P14-201ENST00000449851 741 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 NECAP1P2-201ENST00000455668 727 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 RN7SL213P-201ENST00000463482 317 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 NPY6R-201ENST00000503807 1112 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 KRT19P6-201ENST00000510983 209 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 AC117383.2-201ENST00000514722 322 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 SNX18P27-201ENST00000523611 779 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 OR4A17P-201ENST00000526032 904 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 AP005597.2-201ENST00000526238 341 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 AP001000.1-201ENST00000526843 742 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 OR5BC1P-201ENST00000529327 739 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 PDCL2P2-201ENST00000533651 189 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 ELOCP32-201ENST00000548625 324 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 AC092133.1-201ENST00000565828 719 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 AC074051.3-201ENST00000570238 358 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 ANKRD36BP2-206ENST00000575193 1245 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 ZNF174-205ENST00000575752 1068 ntTSL 5 BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 AC124283.4-201ENST00000581815 456 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 AC005242.1-201ENST00000585658 438 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 AC008498.1-201ENST00000613012 531 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 AC026368.1-201ENST00000614934 690 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 AC005840.5-201ENST00000619166 599 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 AC004009.2-201ENST00000623016 728 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 AC016717.3-201ENST00000624730 554 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 AC027279.4-201ENST00000624371 2072 ntBASIC6.84□□□□□ -1.31
ATG4DQ86TL0 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ATG4DQ86TL0 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC6.84□□□□□ -1.32
ATG4DQ86TL0 AL157700.1-201ENST00000561973 1432 ntBASIC6.84□□□□□ -1.32
ATG4DQ86TL0 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
ATG4DQ86TL0 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
ATG4DQ86TL0 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC6.84□□□□□ -1.32
ATG4DQ86TL0 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
ATG4DQ86TL0 MTND5P17-201ENST00000418405 1603 ntBASIC6.83□□□□□ -1.32
ATG4DQ86TL0 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC6.83□□□□□ -1.32
ATG4DQ86TL0 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms