Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SUMO3P55854 AC112518.2-201ENST00000508565 425 ntBASIC6.25□□□□□ -1.41
SUMO3P55854 AC010460.2-201ENST00000509054 677 ntBASIC6.25□□□□□ -1.41
SUMO3P55854 SUMO2P7-201ENST00000511179 285 ntBASIC6.25□□□□□ -1.41
SUMO3P55854 AC114940.1-201ENST00000512162 1265 ntBASIC6.25□□□□□ -1.41
SUMO3P55854 OSTC-204ENST00000512478 663 ntTSL 5 BASIC6.25□□□□□ -1.41
SUMO3P55854 MTCYBP44-201ENST00000514835 823 ntBASIC6.25□□□□□ -1.41
SUMO3P55854 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.25□□□□□ -1.41
SUMO3P55854 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC6.25□□□□□ -1.41
SUMO3P55854 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.25□□□□□ -1.41
SUMO3P55854 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
SUMO3P55854 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.25□□□□□ -1.41
SUMO3P55854 AC069240.2-201ENST00000550242 609 ntBASIC6.25□□□□□ -1.41
SUMO3P55854 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.25□□□□□ -1.41
SUMO3P55854 AC092375.1-201ENST00000550410 637 ntBASIC6.25□□□□□ -1.41
SUMO3P55854 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC6.25□□□□□ -1.41
SUMO3P55854 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SUMO3P55854 YWHAZP1-201ENST00000556286 722 ntBASIC6.25□□□□□ -1.41
SUMO3P55854 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC6.25□□□□□ -1.41
SUMO3P55854 AC106730.2-201ENST00000566641 540 ntBASIC6.25□□□□□ -1.41
SUMO3P55854 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC6.25□□□□□ -1.41
SUMO3P55854 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.25□□□□□ -1.41
SUMO3P55854 DHFRP1-201ENST00000579682 559 ntBASIC6.25□□□□□ -1.41
SUMO3P55854 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SUMO3P55854 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.25□□□□□ -1.41
SUMO3P55854 MTCO2P22-201ENST00000603246 681 ntBASIC6.25□□□□□ -1.41
SUMO3P55854 AC079880.2-201ENST00000603790 1213 ntBASIC6.25□□□□□ -1.41
SUMO3P55854 AC027449.1-201ENST00000608890 407 ntBASIC6.25□□□□□ -1.41
SUMO3P55854 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.25□□□□□ -1.41
SUMO3P55854 AC105105.5-201ENST00000622635 1294 ntBASIC6.25□□□□□ -1.41
SUMO3P55854 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SUMO3P55854 AC117503.3-201ENST00000623811 601 ntBASIC6.25□□□□□ -1.41
SUMO3P55854 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC6.25□□□□□ -1.41
SUMO3P55854 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.25□□□□□ -1.41
SUMO3P55854 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC6.25□□□□□ -1.41
SUMO3P55854 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SUMO3P55854 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
SUMO3P55854 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SUMO3P55854 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
SUMO3P55854 DDX18P6-201ENST00000450119 1997 ntBASIC6.25□□□□□ -1.41
SUMO3P55854 ZNF90P1-201ENST00000480493 1951 ntBASIC6.25□□□□□ -1.41
SUMO3P55854 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.25□□□□□ -1.41
SUMO3P55854 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
SUMO3P55854 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.25□□□□□ -1.41
SUMO3P55854 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.25□□□□□ -1.41
SUMO3P55854 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.25□□□□□ -1.41
SUMO3P55854 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
SUMO3P55854 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
SUMO3P55854 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SUMO3P55854 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
SUMO3P55854 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.25□□□□□ -1.41
SUMO3P55854 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SUMO3P55854 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.25□□□□□ -1.41
SUMO3P55854 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SUMO3P55854 DLEU2L-201ENST00000371086 3555 ntBASIC6.24□□□□□ -1.41
SUMO3P55854 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SUMO3P55854 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.24□□□□□ -1.41
SUMO3P55854 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.24□□□□□ -1.41
SUMO3P55854 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SUMO3P55854 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SUMO3P55854 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC6.24□□□□□ -1.41
SUMO3P55854 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.24□□□□□ -1.41
SUMO3P55854 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SUMO3P55854 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC6.24□□□□□ -1.41
SUMO3P55854 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
SUMO3P55854 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SUMO3P55854 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SUMO3P55854 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SUMO3P55854 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.24□□□□□ -1.41
SUMO3P55854 Z97989.1-201ENST00000531702 2421 ntBASIC6.24□□□□□ -1.41
SUMO3P55854 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SUMO3P55854 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SUMO3P55854 AP002800.1-201ENST00000624982 2225 ntBASIC6.24□□□□□ -1.41
SUMO3P55854 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SUMO3P55854 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.24□□□□□ -1.41
SUMO3P55854 RN7SKP189-201ENST00000365042 330 ntBASIC6.24□□□□□ -1.41
SUMO3P55854 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.24□□□□□ -1.41
SUMO3P55854 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SUMO3P55854 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SUMO3P55854 SNORA70G-201ENST00000383923 142 ntBASIC6.24□□□□□ -1.41
SUMO3P55854 MIR187-201ENST00000385062 109 ntBASIC6.24□□□□□ -1.41
SUMO3P55854 MIR640-201ENST00000385086 96 ntBASIC6.24□□□□□ -1.41
SUMO3P55854 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SUMO3P55854 EEF1GP6-201ENST00000402309 905 ntBASIC6.24□□□□□ -1.41
SUMO3P55854 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SUMO3P55854 AL139100.1-201ENST00000408001 498 ntBASIC6.24□□□□□ -1.41
SUMO3P55854 AL158827.1-201ENST00000416300 391 ntBASIC6.24□□□□□ -1.41
SUMO3P55854 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC6.24□□□□□ -1.41
SUMO3P55854 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC6.24□□□□□ -1.41
SUMO3P55854 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.24□□□□□ -1.41
SUMO3P55854 PSMD8P1-201ENST00000436275 769 ntBASIC6.24□□□□□ -1.41
SUMO3P55854 CHCHD4P5-201ENST00000436684 427 ntBASIC6.24□□□□□ -1.41
SUMO3P55854 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC6.24□□□□□ -1.41
SUMO3P55854 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.24□□□□□ -1.41
SUMO3P55854 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.24□□□□□ -1.41
SUMO3P55854 RN7SL654P-201ENST00000479178 292 ntBASIC6.24□□□□□ -1.41
SUMO3P55854 AC117395.1-201ENST00000487390 403 ntBASIC6.24□□□□□ -1.41
SUMO3P55854 RN7SL187P-201ENST00000495587 303 ntBASIC6.24□□□□□ -1.41
SUMO3P55854 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC6.24□□□□□ -1.41
SUMO3P55854 OR10J9P-201ENST00000511932 987 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms