Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
HMGCS2P54868 RNU1-134P-201ENST00000362935 165 ntBASIC7.32□□□□□ -1.24
HMGCS2P54868 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
HMGCS2P54868 RN7SKP229-201ENST00000410465 302 ntBASIC7.32□□□□□ -1.24
HMGCS2P54868 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
HMGCS2P54868 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HMGCS2P54868 AC002553.3-201ENST00000453002 341 ntBASIC7.32□□□□□ -1.24
HMGCS2P54868 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.32□□□□□ -1.24
HMGCS2P54868 AC007998.1-201ENST00000474156 672 ntBASIC7.32□□□□□ -1.24
HMGCS2P54868 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC7.32□□□□□ -1.24
HMGCS2P54868 CR383658.1-201ENST00000514609 734 ntBASIC7.32□□□□□ -1.24
HMGCS2P54868 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC7.32□□□□□ -1.24
HMGCS2P54868 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC7.32□□□□□ -1.24
HMGCS2P54868 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.32□□□□□ -1.24
HMGCS2P54868 OTX2-203ENST00000554559 715 ntTSL 5 BASIC7.32□□□□□ -1.24
HMGCS2P54868 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.32□□□□□ -1.24
HMGCS2P54868 AL953862.2-201ENST00000603089 820 ntBASIC7.32□□□□□ -1.24
HMGCS2P54868 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC7.32□□□□□ -1.24
HMGCS2P54868 AC010998.3-201ENST00000613871 631 ntBASIC7.32□□□□□ -1.24
HMGCS2P54868 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.32□□□□□ -1.24
HMGCS2P54868 AL357153.4-201ENST00000620487 1016 ntBASIC7.32□□□□□ -1.24
HMGCS2P54868 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HMGCS2P54868 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
HMGCS2P54868 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.32□□□□□ -1.24
HMGCS2P54868 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
HMGCS2P54868 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
HMGCS2P54868 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
HMGCS2P54868 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.32□□□□□ -1.24
HMGCS2P54868 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.32□□□□□ -1.24
HMGCS2P54868 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
HMGCS2P54868 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
HMGCS2P54868 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HMGCS2P54868 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
HMGCS2P54868 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
HMGCS2P54868 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
HMGCS2P54868 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.32□□□□□ -1.24
HMGCS2P54868 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
HMGCS2P54868 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC7.31□□□□□ -1.24
HMGCS2P54868 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
HMGCS2P54868 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC7.31□□□□□ -1.24
HMGCS2P54868 C10orf25-201ENST00000625168 3078 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
HMGCS2P54868 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
HMGCS2P54868 CYP2G2P-201ENST00000594920 1485 ntBASIC7.31□□□□□ -1.24
HMGCS2P54868 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
HMGCS2P54868 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.31□□□□□ -1.24
HMGCS2P54868 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.31□□□□□ -1.24
HMGCS2P54868 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
HMGCS2P54868 AL023284.3-201ENST00000407767 334 ntBASIC7.31□□□□□ -1.24
HMGCS2P54868 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC7.31□□□□□ -1.24
HMGCS2P54868 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.31□□□□□ -1.24
HMGCS2P54868 MTND6P12-201ENST00000428247 522 ntBASIC7.31□□□□□ -1.24
HMGCS2P54868 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.31□□□□□ -1.24
HMGCS2P54868 RPL31P15-201ENST00000449770 338 ntBASIC7.31□□□□□ -1.24
HMGCS2P54868 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.31□□□□□ -1.24
HMGCS2P54868 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.31□□□□□ -1.24
HMGCS2P54868 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC7.31□□□□□ -1.24
HMGCS2P54868 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
HMGCS2P54868 AC091965.3-201ENST00000506236 208 ntBASIC7.31□□□□□ -1.24
HMGCS2P54868 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC7.31□□□□□ -1.24
HMGCS2P54868 Y_RNA.667-201ENST00000516212 107 ntBASIC7.31□□□□□ -1.24
HMGCS2P54868 SCARNA21.2-201ENST00000516600 166 ntBASIC7.31□□□□□ -1.24
HMGCS2P54868 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.31□□□□□ -1.24
HMGCS2P54868 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.31□□□□□ -1.24
HMGCS2P54868 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.31□□□□□ -1.24
HMGCS2P54868 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.31□□□□□ -1.24
HMGCS2P54868 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
HMGCS2P54868 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.31□□□□□ -1.24
HMGCS2P54868 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC7.31□□□□□ -1.24
HMGCS2P54868 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.31□□□□□ -1.24
HMGCS2P54868 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC7.31□□□□□ -1.24
HMGCS2P54868 AL008723.3-201ENST00000608926 449 ntBASIC7.31□□□□□ -1.24
HMGCS2P54868 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC7.31□□□□□ -1.24
HMGCS2P54868 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC7.31□□□□□ -1.24
HMGCS2P54868 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
HMGCS2P54868 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
HMGCS2P54868 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
HMGCS2P54868 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
HMGCS2P54868 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
HMGCS2P54868 MROH3P-201ENST00000435735 2676 ntBASIC7.31□□□□□ -1.24
HMGCS2P54868 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
HMGCS2P54868 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
HMGCS2P54868 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.3□□□□□ -1.24
HMGCS2P54868 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
HMGCS2P54868 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
HMGCS2P54868 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.3□□□□□ -1.24
HMGCS2P54868 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.3□□□□□ -1.24
HMGCS2P54868 MAPK10-383ENST00000642032 3390 ntBASIC7.3□□□□□ -1.24
HMGCS2P54868 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
HMGCS2P54868 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
HMGCS2P54868 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
HMGCS2P54868 CLCA3P-203ENST00000490028 2781 ntBASIC7.3□□□□□ -1.24
HMGCS2P54868 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.3□□□□□ -1.24
HMGCS2P54868 RNA5SP284-201ENST00000384547 118 ntBASIC7.3□□□□□ -1.24
HMGCS2P54868 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
HMGCS2P54868 AL451046.1-201ENST00000406097 534 ntBASIC7.3□□□□□ -1.24
HMGCS2P54868 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC7.3□□□□□ -1.24
HMGCS2P54868 AL139415.1-201ENST00000424862 352 ntBASIC7.3□□□□□ -1.24
HMGCS2P54868 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC7.3□□□□□ -1.24
HMGCS2P54868 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.3□□□□□ -1.24
HMGCS2P54868 NXT1P1-201ENST00000458481 316 ntBASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms